RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 ARHGAP1Q07960 439 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 GRIN2CQ14957 1233 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 OTOP2Q7RTS6 562 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 CCDC155Q8N6L0 562 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 IGDCC4Q8TDY8 1250 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 AFG1LQ8WV93 481 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 LZTS2Q9BRK4 669 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 PDCD2LQ9BRP1 358 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 KATNAL1Q9BW62 490 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 NOD1Q9Y239 953 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 SLC4A7Q9Y6M7 1214 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 MYH6P13533 1939 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 PPP1R11O60927 126 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 STAM2O75886 525 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 MMP3P08254 477 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 CYP2C9P11712 490 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 KIF5BP33176 963 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 GNAQP50148 359 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 TMEM67Q5HYA8 995 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 PPTC7Q8NI37 304 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 PHOSPHO2Q8TCD6 241 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 MRVI1Q9Y6F6 885 aa14.12□□□□□ -0.15
GTF3C1-204ENST00000564664 GRXCR1A8MXD5 290 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 IQCF3P0C7M6 154 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 MYO9BQ13459 2157 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 PTGISQ16647 500 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 SCLYQ96I15 445 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 PIGSQ96S52 555 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 GAS2L1Q99501 681 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 PCDHA11Q9Y5I1 949 aa14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 RBM8AQ9Y5S9 174 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-204ENST00000564664 KIAA1217Q5T5P2 1943 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 CYTH3O43739 400 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 DDAH1O94760 285 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 HOXD8P13378 290 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 CCND2P30279 289 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 MCM5P33992 734 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 PBX2P40425 430 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 PGM5Q15124 567 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 CELF3Q5SZQ8 465 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 MYSM1Q5VVJ2 828 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 CHST3Q7LGC8 479 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 HOMER1Q86YM7 354 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 C7orf31Q8N865 590 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 CTCFLQ8NI51 663 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 AFAP1L1Q8TED9 768 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 KAT2BQ92831 832 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 VWCEQ96DN2 955 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 SPZ1Q9BXG8 430 aa14.1□□□□□ -0.15
GTF3C1-204ENST00000564664 RGS20O76081 388 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 BAIAP3O94812 1187 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 F2P00734 622 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 CALM1P0DP23 149 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 CALM2P0DP24 149 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 CALM3P0DP25 149 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 MYCLP12524 364 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 LIFRP42702 1097 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 ANTXR2P58335 489 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 IRX6P78412 446 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 RBL2Q08999 1139 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 SLC35G1Q2M3R5 365 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 GNPTABQ3T906 1256 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 XRRA1Q6P2D8 792 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 SLC9A7Q96T83 725 aa14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 BAZ2BQ9UIF8 2168 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-204ENST00000564664 ZBBXA8MT70 800 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 HAS3O00219 553 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 HOXA13P31271 388 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 ICAM3P32942 547 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 PSEN2P49810 448 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 GDF6Q6KF10 455 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 ZNF654Q8IZM8 581 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 SYMPKQ92797 1274 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 CUL5Q93034 780 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 RRP36Q96EU6 259 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 SPATA33Q96N06 139 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 LSG1Q9H089 658 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 LY9Q9HBG7 655 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 SENP2Q9HC62 589 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 GTF2IRD1Q9UHL9 959 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
GTF3C1-204ENST00000564664 CDH23Q9H251 3354 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 PIK3CDO00329 1044 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 PRC1O43663 620 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 SELPP16109 830 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms