RNA–Protein interactions for RNA: ENST00000564547.1

TRAPPC2L-208, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-208ENST00000564547 PNMA1Q8ND90 353 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 TTC14Q96N46 770 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 C5orf42Q9H799 3197 aa16.53■□□□□ 0.24
TRAPPC2L-208ENST00000564547 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 TRIOO75962 3097 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 LOC102724159A0A0B4J2E5 919 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 TRIM6-TRIM34B2RNG4 842 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 SP2Q02086 613 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 PWP2Q15269 919 aaKnown RBP16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 ANKS1AQ92625 1134 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 C11orf16Q9NQ32 467 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
TRAPPC2L-208ENST00000564547 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PFKMP08237 780 aa16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CKBP12277 381 aa16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 FAM117BQ6P1L5 589 aa16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
TRAPPC2L-208ENST00000564547 HAS3O00219 553 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 GH1P01241 217 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CXCL10P02778 98 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 RFC2P35250 354 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PSEN2P49810 448 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ZNF618Q5T7W0 954 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CYB5R4Q7L1T6 521 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SESTD1Q86VW0 696 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PHOSPHO2Q8TCD6 241 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 RMDN3Q96TC7 470 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SUGCTQ9HAC7 445 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 WDFY4Q6ZS81 3184 aa16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 COL4A4P53420 1690 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SELPP16109 830 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 BFSP2Q13515 415 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 COL9A3Q14050 684 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ESR2Q92731 530 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
TRAPPC2L-208ENST00000564547 LINC01553A4QN01 128 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ZNF213O14771 459 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 KPNA6O60684 536 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 NR3C2P08235 984 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ACTN1P12814 892 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MFSD10Q14728 455 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 HSDL1Q3SXM5 330 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 NSUN6Q8TEA1 469 aaKnown RBP16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ABCB11O95342 1321 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 LGR5O75473 907 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CFBP00751 764 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 HSD17B4P51659 736 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 RBL2Q08999 1139 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 SEC23AQ15436 765 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 STXBP2Q15833 593 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 KIAA0753Q2KHM9 967 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MYSM1Q5VVJ2 828 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 AFAP1L1Q8TED9 768 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 C17orf80Q9BSJ5 609 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 LRFN3Q9BTN0 628 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MAD2L2Q9UI95 211 aa16.47■□□□□ 0.23
TRAPPC2L-208ENST00000564547 CYTH3O43739 400 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 GJB5O95377 273 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 F2P00734 622 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 MYCLP12524 364 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 HOXD8P13378 290 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 PDCD2LQ9BRP1 358 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 C16orf70Q9BSU1 422 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 KAT14Q9H8E8 782 aa16.46■□□□□ 0.23
TRAPPC2L-208ENST00000564547 RAD50Q92878 1312 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 KIAA1217Q5T5P2 1943 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 BAIAP3O94812 1187 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 PDE4AP27815 886 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 NUCB1Q02818 461 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 BRDTQ58F21 947 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC2L-208ENST00000564547 CNKSR3Q6P9H4 555 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms