RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MYO9BQ13459 2157 aa27.77■■■□□ 2.04
NME3-206ENST00000564252 RFC2P35250 354 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 RABGGTBP53611 331 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 GRM4Q14833 912 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 KAT2BQ92831 832 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 EMID1Q96A84 441 aaPredicted RBP27.76■■■□□ 2.03
NME3-206ENST00000564252 SLC28A3Q9HAS3 691 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 SENP2Q9HC62 589 aa27.76■■■□□ 2.03
NME3-206ENST00000564252 IFIT3O14879 490 aaKnown RBP27.75■■■□□ 2.03
NME3-206ENST00000564252 IQCF3P0C7M6 154 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 CHMP4BP1P59074 171 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 STOX1Q6ZVD7 989 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 SESTD1Q86VW0 696 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 RIOX1Q9H6W3 641 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 MAP3K20Q9NYL2 800 aaKnown RBP27.75■■■□□ 2.03
NME3-206ENST00000564252 PCDHA1Q9Y5I3 950 aa27.75■■■□□ 2.03
NME3-206ENST00000564252 E7EWF7 191 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 SGSM2O43147 1006 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 ATP2A2P16615 1042 aaKnown RBP27.74■■■□□ 2.03
NME3-206ENST00000564252 CASTP20810 708 aaKnown RBP27.74■■■□□ 2.03
NME3-206ENST00000564252 IRX6P78412 446 aaPredicted RBP27.74■■■□□ 2.03
NME3-206ENST00000564252 ADGRE1Q14246 886 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 RETREG2Q8NC44 543 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 CTAGE1Q96RT6 745 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 PDCD2LQ9BRP1 358 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 NOD1Q9Y239 953 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 PCDHA11Q9Y5I1 949 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 MRVI1Q9Y6F6 885 aa27.74■■■□□ 2.03
NME3-206ENST00000564252 MYOGP15173 224 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 BFSP2Q13515 415 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 PTGISQ16647 500 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 DGKDQ16760 1214 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 GDF6Q6KF10 455 aaPredicted RBP27.73■■■□□ 2.03
NME3-206ENST00000564252 HOMER1Q86YM7 354 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 SAMD3Q8N6K7 520 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 PIGSQ96S52 555 aa27.73■■■□□ 2.03
NME3-206ENST00000564252 BAZ2BQ9UIF8 2168 aaKnown RBP27.72■■■□□ 2.03
NME3-206ENST00000564252 ERICH2A1L162 156 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 CYTH3O43739 400 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 RGS20O76081 388 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 HOXA13P31271 388 aaPredicted RBP27.72■■■□□ 2.03
NME3-206ENST00000564252 TROAPQ12815 778 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 RALYLQ86SE5 291 aaKnown RBP27.72■■■□□ 2.03
NME3-206ENST00000564252 NCOA7Q8NI08 942 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 TRANK1O15050 2925 aa27.72■■■□□ 2.03
NME3-206ENST00000564252 MYCLP12524 364 aaPredicted RBP27.71■■■□□ 2.03
NME3-206ENST00000564252 ACTN1P12814 892 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 LAMC2Q13753 1193 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 WTAPQ15007 396 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 PPTC7Q8NI37 304 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 TTC28Q96AY4 2481 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 TET1Q8NFU7 2136 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 TRIP12Q14669 1992 aaPredicted RBP27.71■■■□□ 2.03
NME3-206ENST00000564252 MYH7BA7E2Y1 1941 aa27.71■■■□□ 2.03
NME3-206ENST00000564252 ANTXR2P58335 489 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 SART3Q15020 963 aaKnown RBP27.7■■■□□ 2.02
NME3-206ENST00000564252 PGM5Q15124 567 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 PPP2R2DQ66LE6 453 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 VSIG10LQ86VR7 867 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 IL31RAQ8NI17 732 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 CAGE1Q8TC20 777 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 PRDM6Q9NQX0 595 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 GTF2IRD1Q9UHL9 959 aa27.7■■■□□ 2.02
NME3-206ENST00000564252 REV3LO60673 3130 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 F2P00734 622 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 PSEN2P49810 448 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 TRAF1Q13077 416 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 DHX37Q8IY37 1157 aaKnown RBP27.69■■■□□ 2.02
NME3-206ENST00000564252 CCDC155Q8N6L0 562 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 AFAP1L1Q8TED9 768 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 PPM1EQ8WY54 764 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 DHX38Q92620 1227 aaKnown RBP27.69■■■□□ 2.02
NME3-206ENST00000564252 MAP4K1Q92918 833 aa27.69■■■□□ 2.02
NME3-206ENST00000564252 FTOQ9C0B1 505 aaKnown RBP eCLIP27.69■■■□□ 2.02
NME3-206ENST00000564252 MUC3AQ02505 3323 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 PNMA6FA0A0J9YX94 578 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 HAS3O00219 553 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 ZNF286BP0CG31 522 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 HOXD8P13378 290 aaPredicted RBP27.68■■■□□ 2.02
NME3-206ENST00000564252 MYSM1Q5VVJ2 828 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 MB21D2Q8IYB1 491 aaPredicted RBP27.68■■■□□ 2.02
NME3-206ENST00000564252 IGDCC4Q8TDY8 1250 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 SLC9A7Q96T83 725 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 KATNAL1Q9BW62 490 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 HDAC6Q9UBN7 1215 aa27.68■■■□□ 2.02
NME3-206ENST00000564252 GCOM1H8Y6P7 765 aaPredicted RBP27.67■■■□□ 2.02
NME3-206ENST00000564252 POLR2MP0CAP2 368 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 IGFBP4P22692 258 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 RBL2Q08999 1139 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 TMEM67Q5HYA8 995 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 KCNV1Q6PIU1 500 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 PHOSPHO2Q8TCD6 241 aa27.67■■■□□ 2.02
NME3-206ENST00000564252 CCND2P30279 289 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 SP2Q02086 613 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 MFSD10Q14728 455 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 GPNMBQ14956 572 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 KIAA0753Q2KHM9 967 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 CELF3Q5SZQ8 465 aaKnown RBP27.66■■■□□ 2.02
NME3-206ENST00000564252 CATIPQ7Z7H3 387 aa27.66■■■□□ 2.02
NME3-206ENST00000564252 C7orf31Q8N865 590 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms