RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 PTGS1P23219 599 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 CALML3P27482 149 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 FPGSQ05932 587 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 TMEM63BQ5T3F8 832 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 FAM126BQ8IXS8 530 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 SLC43A3Q8NBI5 491 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 UBA5Q9GZZ9 404 aa18.47■□□□□ 0.55
LPCAT4-205ENST00000563748 RBM47A0AV96 593 aaKnown RBP18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 DYNC1LI2O43237 492 aaPredicted RBP18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 CABYRO75952 493 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 TIMP1P01033 207 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 RPS6P62753 249 aaKnown RBP18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 DUSP28Q4G0W2 176 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 CXCL17Q6UXB2 119 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 STXBP5LQ9Y2K9 1186 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 TAF6LQ9Y6J9 622 aa18.46■□□□□ 0.55
LPCAT4-205ENST00000563748 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 GADD45BO75293 160 aaPredicted RBP18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 EDNRBP24530 442 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 CDC37Q16543 378 aaPredicted RBP18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 USH1GQ495M9 461 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 DNERQ8NFT8 737 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 BRF1Q92994 677 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 UBAC1Q9BSL1 405 aa18.45■□□□□ 0.54
LPCAT4-205ENST00000563748 FIBPO43427 364 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 ZEB2O60315 1214 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 CD4P01730 458 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 MCM5P33992 734 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 SMAD3P84022 425 aaKnown RBP18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 DNM1Q05193 864 aaKnown RBP18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 SEC23AQ15436 765 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 STOX1Q6ZVD7 989 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 WDR11Q9BZH6 1224 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 MAF1Q9H063 256 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
LPCAT4-205ENST00000563748 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 ABCB11O95342 1321 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 TLR3O15455 904 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 PARP1P09874 1014 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 PDE4DQ08499 809 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 IFIT1BQ5T764 474 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 CYB5R4Q7L1T6 521 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 CHAMP1Q96JM3 812 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 RNPC3Q96LT9 517 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 MPHOSPH6Q99547 160 aaKnown RBP18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 SEZ6LQ9BYH1 1024 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 GDPD2Q9HCC8 539 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
LPCAT4-205ENST00000563748 H3BQV1 296 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 QRICH1Q2TAL8 776 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 NCOA7Q8NI08 942 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 GUCD1Q96NT3 240 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 JMJD4Q9H9V9 463 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 SCRN1Q12765 414 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 ZNF697Q5TEC3 545 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 SCFD2Q8WU76 684 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 RRAGDQ9NQL2 400 aaPredicted RBP18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
LPCAT4-205ENST00000563748 SCN10AQ9Y5Y9 1956 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 B4DLN1 442 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 PPIGQ13427 754 aaKnown RBP eCLIP18.41■□□□□ 0.549e-9■■■■■ 33.6
LPCAT4-205ENST00000563748 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 FBXO11Q86XK2 927 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 NSUN7Q8NE18 718 aaKnown RBP18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 SYTL5Q8TDW5 730 aaPredicted RBP18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 TBC1D5Q92609 795 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 SPATA32Q96LK8 384 aa18.41■□□□□ 0.54
LPCAT4-205ENST00000563748 GOLGA6L4A6NEF3 574 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 NKRFO15226 690 aaKnown RBP eCLIP18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 CPT1AP50416 773 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 PSMC6P62333 389 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 TRDNQ13061 729 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 RESTQ13127 1097 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 STK3Q13188 491 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 C16orf59Q7L2K0 433 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 MCF2L2Q86YR7 1114 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 OR6J1Q8NGC5 347 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 FAM161BQ96MY7 647 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.4■□□□□ 0.541e-16■■■■■ 48.7
LPCAT4-205ENST00000563748 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 VAT1LQ9HCJ6 419 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 CCDC39Q9UFE4 941 aa18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 MRPL11Q9Y3B7 192 aaKnown RBP18.4■□□□□ 0.54
LPCAT4-205ENST00000563748 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms