RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 NMT2O60551 498 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 TOP1P11387 765 aaKnown RBP9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 MX1P20591 662 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 MRPL12P52815 198 aaKnown RBP9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 RABGGTBP53611 331 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 SNAP25P60880 206 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 SYDE2Q5VT97 1194 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 LAPTM4BQ86VI4 370 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 PHOSPHO2Q8TCD6 241 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 SCFD2Q8WU76 684 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 SCLYQ96I15 445 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 SLC9A7Q96T83 725 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 TRMT13Q9NUP7 481 aaKnown RBP9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 LRRC37A2A6NM11 1700 aa9.64□□□□□ -0.87
PDXDC1-208ENST00000563522 WDR19Q8NEZ3 1342 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 NFIBO00712 420 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 MYL3P08590 195 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 PCP11498 1178 aaKnown RBP9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 CYP2C9P11712 490 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 BMP1P13497 986 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 PTGS1P23219 599 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 EDNRBP24530 442 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 PDE4DQ08499 809 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 BFSP2Q13515 415 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 TTLL4Q14679 1199 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 PPP2R5BQ15173 497 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 TMEM63BQ5T3F8 832 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 RGS22Q8NE09 1264 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 OR6J1Q8NGC5 347 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 CLEC4DQ8WXI8 215 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 EVI5LQ96CN4 794 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 C1QTNF1Q9BXJ1 281 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 HELLSQ9NRZ9 838 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 COG5Q9UP83 839 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 MCM3APO60318 1980 aa9.63□□□□□ -0.87
PDXDC1-208ENST00000563522 ZMYM6O95789 1325 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 BAIAP3O94812 1187 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 CA3P07451 260 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 MYOGP15173 224 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 SLC16A2P36021 539 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 NT5C2P49902 561 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 PTPN5P54829 565 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 SLC30A10Q6XR72 485 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 RNF207Q6ZRF8 634 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 RASGRP2Q7LDG7 609 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 OTUD7AQ8TE49 926 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 TTC14Q96N46 770 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 PURBQ96QR8 312 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 TMEM47Q9BQJ4 181 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 INCENPQ9NQS7 918 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 MTCH2Q9Y6C9 303 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 MUC3AQ02505 3323 aa9.62□□□□□ -0.87
PDXDC1-208ENST00000563522 SALL3Q9BXA9 1300 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 IQCF3P0C7M6 154 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 SNHG28P0DPA3 235 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 PDHBP11177 359 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 CALML3P27482 149 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 RPS6P62753 249 aaKnown RBP9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 ZNF543Q08ER8 600 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 FAM47CQ5HY64 1035 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 GPATCH4Q5T3I0 446 aaKnown RBP9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 VPS53Q5VIR6 699 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 DEFB128Q7Z7B8 93 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 HERC6Q8IVU3 1022 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 MICALL1Q8N3F8 863 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 CAGE1Q8TC20 777 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 AFAP1L1Q8TED9 768 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 GPCPD1Q9NPB8 672 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 TOMM22Q9NS69 142 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
PDXDC1-208ENST00000563522 FGAP02671 866 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 PLA2G5P39877 138 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 MLLT3P42568 568 aaPredicted RBP9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 PRSS12P56730 875 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 TAP1Q03518 808 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 RBL2Q08999 1139 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 CCDC62Q6P9F0 684 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 SESTD1Q86VW0 696 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 FTOQ9C0B1 505 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 LMCD1Q9NZU5 365 aa9.6□□□□□ -0.87
PDXDC1-208ENST00000563522 NOD1Q9Y239 953 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms