RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 SDSP20132 328 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 SNAP25P60880 206 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 ITGA7Q13683 1181 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
SNX29-202ENST00000563308 IGSF5Q9NSI5 407 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 FBXO40Q9UH90 709 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 PRR12Q9ULL5 1215 aa11.92□□□□□ -0.5
SNX29-202ENST00000563308 FAM208BQ5VWN6 2430 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 ASTN1O14525 1302 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 MAP1BP46821 2468 aaKnown RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 LCHNA4D1U4 455 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 HAND2P61296 217 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 SMAD4Q13485 552 aaKnown RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 TCEAL5Q5H9L2 206 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 TTBK2Q6IQ55 1244 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 TBC1D10CQ8IV04 446 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 ANKRD35Q8N283 1001 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 RAD9AQ99638 391 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 A1CFQ9NQ94 594 aaKnown RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 DLL3Q9NYJ7 618 aa11.91□□□□□ -0.5
SNX29-202ENST00000563308 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
SNX29-202ENST00000563308 TNKSO95271 1327 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 B4GALT4O60513 344 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 LMNAP02545 664 aaKnown RBP11.9□□□□□ -0.5
SNX29-202ENST00000563308 GJA9P57773 515 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 ACVR2BQ13705 512 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 NOL8Q76FK4 1167 aaKnown RBP11.9□□□□□ -0.5
SNX29-202ENST00000563308 ARMCX2Q7L311 632 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 RIPOR3Q96MK2 946 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 SEMA4AQ9H3S1 761 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 ACAD9Q9H845 621 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
SNX29-202ENST00000563308 DDX49Q9Y6V7 483 aaKnown RBP11.9□□□□□ -0.5
SNX29-202ENST00000563308 CTAGE5O15320 804 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 TOP1P11387 765 aaKnown RBP11.89□□□□□ -0.51
SNX29-202ENST00000563308 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
SNX29-202ENST00000563308 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 UPF3AQ9H1J1 476 aaKnown RBP11.89□□□□□ -0.51
SNX29-202ENST00000563308 RANBP17Q9H2T7 1088 aaKnown RBP11.89□□□□□ -0.51
SNX29-202ENST00000563308 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 CD207Q9UJ71 328 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 ISY1Q9ULR0 285 aaKnown RBP11.89□□□□□ -0.51
SNX29-202ENST00000563308 MTMR7Q9Y216 660 aa11.89□□□□□ -0.51
SNX29-202ENST00000563308 NEDD4P46934 1319 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
SNX29-202ENST00000563308 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 SNHG28P0DPA3 235 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 ALAS1P13196 640 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 PDE4AP27815 886 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 SLC16A2P36021 539 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 NKX3-2P78367 333 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
SNX29-202ENST00000563308 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
SNX29-202ENST00000563308 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
SNX29-202ENST00000563308 IL25Q9H293 177 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
SNX29-202ENST00000563308 SIP14410 1827 aa11.88□□□□□ -0.51
SNX29-202ENST00000563308 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
SNX29-202ENST00000563308 ICAM1P05362 532 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 PDHBP11177 359 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
SNX29-202ENST00000563308 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 SYDE2Q5VT97 1194 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
SNX29-202ENST00000563308 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 TTC14Q96N46 770 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 SAMD11Q96NU1 681 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 GPCPD1Q9NPB8 672 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
SNX29-202ENST00000563308 FRMPD2Q68DX3 1309 aaPredicted RBP11.86□□□□□ -0.51
SNX29-202ENST00000563308 CFAP47Q6ZTR5 3102 aa11.86□□□□□ -0.51
SNX29-202ENST00000563308 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
SNX29-202ENST00000563308 SOBPA7XYQ1 873 aa11.86□□□□□ -0.51
SNX29-202ENST00000563308 PTGS1P23219 599 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms