RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NOLC1Q14978 699 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 NELFBQ8WX92 580 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 LARP4BQ92615 738 aaKnown RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 WRNIP1Q96S55 665 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 SLF1Q9BQI6 1058 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 RWDD2AQ9UIY3 292 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 DDNO94850 711 aaPredicted RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 VCAM1P19320 739 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 SPP2Q13103 211 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 PAK1Q13153 545 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 SV2BQ7L1I2 683 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 SLFN12Q8IYM2 578 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 SCYL3Q8IZE3 742 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 ADSSL1Q8N142 457 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 PRPF38AQ8NAV1 312 aaKnown RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 RAD54LQ92698 747 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 TANGO6Q9C0B7 1094 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 MYMKA6NI61 221 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 ICAM1P05362 532 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 CYP3A4P08684 503 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 AMPD3Q01432 767 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 SPIRE1Q08AE8 756 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 ARMCX5Q6P1M9 558 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 APTXQ7Z2E3 356 aaKnown RBP10.54□□□□□ -0.72
LINC00838-201ENST00000562956 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 ABCB11O95342 1321 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 DYNC1I1O14576 645 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 MSH4O15457 936 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 PTPRAP18433 802 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 CCT6AP40227 531 aaKnown RBP10.54□□□□□ -0.72
LINC00838-201ENST00000562956 UBXN2AP68543 259 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 SPTLC3Q9NUV7 552 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 IGLV3-22A0A075B6J6 115 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 TBX3O15119 743 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 FLOT1O75955 427 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 FCER1AP12319 257 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 ZNF76P36508 570 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 PMS1P54277 932 aaKnown RBP10.54□□□□□ -0.72
LINC00838-201ENST00000562956 GSDMDP57764 484 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 PDE4DQ08499 809 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 STK4Q13043 487 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 HYIQ5T013 277 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
LINC00838-201ENST00000562956 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 HOOK2Q96ED9 719 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
LINC00838-201ENST00000562956 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
LINC00838-201ENST00000562956 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 TRIM49BA6NDI0 452 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 POTECB2RU33 542 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 NFIBO00712 420 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 BACE1P56817 501 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 CCZ1BP86790 482 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 CCZ1P86791 482 aaPredicted RBP10.53□□□□□ -0.72
LINC00838-201ENST00000562956 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
LINC00838-201ENST00000562956 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 DYMQ7RTS9 669 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 CPXCR1Q8N123 301 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 SYT17Q9BSW7 474 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 SLC38A10Q9HBR0 1119 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 PICK1Q9NRD5 415 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 MED24O75448 989 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 SKILP12757 684 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 YBX3P16989 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00838-201ENST00000562956 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 NR1I3Q14994 352 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 DDX12PQ92771 950 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
LINC00838-201ENST00000562956 FAM20AQ96MK3 541 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 RAVER2Q9HCJ3 691 aaKnown RBP10.53□□□□□ -0.72
LINC00838-201ENST00000562956 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
LINC00838-201ENST00000562956 KDM3AQ9Y4C1 1321 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 E9PMD0 336 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 ZSCAN20P17040 1043 aaPredicted RBP10.52□□□□□ -0.72
LINC00838-201ENST00000562956 USP14P54578 494 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 PRKG1Q13976 671 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 SLC30A10Q6XR72 485 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 WNK4Q96J92 1243 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.72
LINC00838-201ENST00000562956 NT5C3AQ9H0P0 336 aa10.52□□□□□ -0.72
LINC00838-201ENST00000562956 VAV3Q9UKW4 847 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms