RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TROAPQ12815 778 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 KARSQ15046 597 aaKnown RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 SRBD1Q8N5C6 995 aaKnown RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 MB21D1Q8N884 522 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 KIFAP3Q92845 792 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 KDM3BQ7LBC6 1761 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 EEF1GP26641 437 aaKnown RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 KRT76Q01546 638 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
TCF4-216ENST00000562680 PHF20Q9BVI0 1012 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 PRM3Q9NNZ6 103 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 TBX3O15119 743 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 PDHBP11177 359 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 GNG11P61952 73 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 MAP3K9P80192 1104 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 ARHGAP4P98171 946 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 DACT2Q5SW24 774 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 DPP9Q86TI2 863 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 DAGLBQ8NCG7 672 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 ANKS1AQ92625 1134 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 BAG1Q99933 345 aaPredicted RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 ACAD9Q9H845 621 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.07
TCF4-216ENST00000562680 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 RNF146Q9NTX7 359 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 M0QZ92 97 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 ARHGAP6O43182 974 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 TUBB2AQ13885 445 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 TFDP1Q14186 410 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 DCAF17Q5H9S7 520 aaPredicted RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 ZNF658Q5TYW1 1059 aaPredicted RBP8.34□□□□□ -1.07
TCF4-216ENST00000562680 XRRA1Q6P2D8 792 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 FAM167AQ96KS9 214 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 TUBB2BQ9BVA1 445 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 BLZF1Q9H2G9 400 aa8.34□□□□□ -1.07
TCF4-216ENST00000562680 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 SFNP31947 248 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 NOP2P46087 812 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 ATP2C1P98194 919 aaPredicted RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 MORC3Q14149 939 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 HSP90AA4PQ58FG1 418 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 SPECC1LQ69YQ0 1117 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 PPP4R3CPQ6ZMV5 832 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ENOX1Q8TC92 643 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 DTNBO60941 627 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 PSAPP07602 524 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 CXCL9Q07325 125 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 DMP1Q13316 513 aaPredicted RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 NOLC1Q14978 699 aaKnown RBP eCLIP8.33□□□□□ -1.08
TCF4-216ENST00000562680 CYP26C1Q6V0L0 522 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ZSWIM4Q9H7M6 989 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ARMCX3Q9UH62 379 aaPredicted RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 YWHAEP62258 255 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 COG2Q14746 738 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 UBE2SQ16763 222 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 PTF1AQ7RTS3 328 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 VPS16Q9H269 839 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 ADARB2Q9NS39 739 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 TRMT1Q9NXH9 659 aaKnown RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 FAM184BQ9ULE4 1060 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 PVALEFA0A1B0GWK0 134 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 C16orf45Q96MC5 204 aaPredicted RBP8.33□□□□□ -1.08
TCF4-216ENST00000562680 NCAPGQ9BPX3 1015 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 DEFB129Q9H1M3 183 aa8.33□□□□□ -1.08
TCF4-216ENST00000562680 TUBBP07437 444 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 PDIA5Q14554 519 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SEC23AQ15436 765 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 STXBP2Q15833 593 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 KCNV1Q6PIU1 500 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 TEX13BQ9BXU2 312 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 GGA3Q9NZ52 723 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 CHGBP05060 677 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 BCRP11274 1271 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 PTGS1P23219 599 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 CDC25BP30305 580 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SNX16P57768 344 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 BIRC3Q13489 604 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SLC9C1Q4G0N8 1177 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 C10orf67Q8IYJ2 551 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 STAMQ92783 540 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 FAM81BQ96LP2 452 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 PALM3A6NDB9 673 aaPredicted RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 ANGEL2Q5VTE6 544 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 GMCL1Q96IK5 515 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 RMDN3Q96TC7 470 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms