RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 MANSC4A6NHS7 340 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 USP2O75604 605 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 NDUFB10O96000 172 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 MMP1P03956 469 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 INPP5BP32019 993 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 SLC1A4P43007 532 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 TTBK2Q6IQ55 1244 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 FAM177A1Q8N128 213 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 SHISA4Q96DD7 197 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 MTMR8Q96EF0 704 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 RRP36Q96EU6 259 aaKnown RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 CPVLQ9H3G5 476 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 SH2D4AQ9H788 454 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 VCPKMTQ9H867 229 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 SH3GLB2Q9NR46 395 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.64□□□□□ -1.03
SNX29-201ENST00000562510 KCNJ14Q9UNX9 436 aa8.64□□□□□ -1.03
SNX29-201ENST00000562510 ESPNB1AK53 854 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 KIF28PB7ZC32 967 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 RAD21O60216 631 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 ZBTB48P10074 688 aaPredicted RBP8.63□□□□□ -1.03
SNX29-201ENST00000562510 BMP3P12645 472 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 PTMSP20962 102 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 U2AF2P26368 475 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX29-201ENST00000562510 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX29-201ENST00000562510 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 IRF5Q13568 498 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 SAFBQ15424 915 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX29-201ENST00000562510 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 KIAA1755Q5JYT7 1200 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 NOL9Q5SY16 702 aaKnown RBP8.63□□□□□ -1.03
SNX29-201ENST00000562510 ATL3Q6DD88 541 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 BTNL9Q6UXG8 535 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 KCTD1Q719H9 257 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 OTOP1Q7RTM1 612 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 ADGRF4Q8IZF3 695 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX29-201ENST00000562510 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 ZKSCAN4Q969J2 545 aaPredicted RBP8.63□□□□□ -1.03
SNX29-201ENST00000562510 ARMC5Q96C12 935 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 PIGSQ96S52 555 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 WRNIP1Q96S55 665 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 WDR18Q9BV38 432 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 FOXP1Q9H334 677 aaPredicted RBP8.63□□□□□ -1.03
SNX29-201ENST00000562510 R3HDMLQ9H3Y0 253 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 VAT1LQ9HCJ6 419 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 LMBRD1Q9NUN5 540 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 BARHL2Q9NY43 387 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 VPS54Q9P1Q0 977 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 CNPY2Q9Y2B0 182 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 TRIM17Q9Y577 477 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 SSC5DA1L4H1 1573 aa8.63□□□□□ -1.03
SNX29-201ENST00000562510 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 BTBD18B2RXH4 712 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 STXBP3O00186 592 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 PLA2G6O60733 806 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 PTPRAP18433 802 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 SLC16A2P36021 539 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 KRT85P78386 507 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 NPY5RQ15761 445 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 WWC2Q6AWC2 1192 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 CCDC84Q86UT8 332 aaPredicted RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 DIS3L2Q8IYB7 885 aaKnown RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 ERO1AQ96HE7 468 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 NUP88Q99567 741 aaPredicted RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 SCAND2PQ9GZW5 306 aaPredicted RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 KIAA1683Q9H0B3 1180 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 CYLDQ9NQC7 956 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 SEC63Q9UGP8 760 aaKnown RBP8.62□□□□□ -1.03
SNX29-201ENST00000562510 FZD1Q9UP38 647 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 PAPPA2Q9BXP8 1791 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
SNX29-201ENST00000562510 USP17L10C9JJH3 530 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 TMEM232C9JQI7 657 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 hCG_1984214I3L0E3 225 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 ZBTB5O15062 677 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
SNX29-201ENST00000562510 NCLP19338 710 aaKnown RBP8.61□□□□□ -1.03
SNX29-201ENST00000562510 CALML3P27482 149 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 KRT2P35908 639 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 NLRP5P59047 1200 aa8.61□□□□□ -1.03
SNX29-201ENST00000562510 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
SNX29-201ENST00000562510 MAP3K11Q16584 847 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms