RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CHST3Q7LGC8 479 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MTMR8Q96EF0 704 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PXMP2Q9NR77 195 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MAD2L2Q9UI95 211 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CA3P07451 260 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 GHRHRQ02643 423 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 BFSP2Q13515 415 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PTGISQ16647 500 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 SESTD1Q86VW0 696 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RETREG2Q8NC44 543 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 AMNQ9BXJ7 453 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 THEGQ9P2T0 379 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 NOD1Q9Y239 953 aa19.45■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 EIF3JO75822 258 aaKnown RBP19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 NR3C2P08235 984 aa19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ACTN1P12814 892 aa19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 SLC35G1Q2M3R5 365 aa19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TMEM67Q5HYA8 995 aa19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TTC22Q5TAA0 569 aa19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 EMID1Q96A84 441 aaPredicted RBP19.44■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PTPRSQ13332 1948 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PALM3A6NDB9 673 aaPredicted RBP19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ZBTB5O15062 677 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RGS20O76081 388 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CASTP20810 708 aaKnown RBP19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 GPNMBQ14956 572 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 SLC9A7Q96T83 725 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 FTOQ9C0B1 505 aaKnown RBP eCLIP19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 MRVI1Q9Y6F6 885 aa19.43■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ARHGEF15O94989 841 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CYP21A2P08686 494 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PTH1RQ03431 593 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 DGKDQ16760 1214 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 STOX1Q6ZVD7 989 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PHOSPHO2Q8TCD6 241 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 AFAP1L1Q8TED9 768 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ASB2Q96Q27 587 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PDCD2LQ9BRP1 358 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 SENP2Q9HC62 589 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 GTF2IRD1Q9UHL9 959 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PCDHA1Q9Y5I3 950 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TAF6LQ9Y6J9 622 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TET1Q8NFU7 2136 aa19.42■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TRIP12Q14669 1992 aaPredicted RBP19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RBAK-RBAKDNI3L0D1 243 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RFXAPO00287 272 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 F2P00734 622 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ZNF286BP0CG31 522 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 HOXA13P31271 388 aaPredicted RBP19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 GRM4Q14833 912 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 HERC6Q8IVU3 1022 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CCDC155Q8N6L0 562 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 IL31RAQ8NI17 732 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PPTC7Q8NI37 304 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 CERS4Q9HA82 394 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 HDAC6Q9UBN7 1215 aa19.41■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 EPOPA6NHQ4 379 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 HAS3O00219 553 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 BAIAP3O94812 1187 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 MYCLP12524 364 aaPredicted RBP19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PSEN2P49810 448 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RBL2Q08999 1139 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 LAMC2Q13753 1193 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PGM5Q15124 567 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 LRRC8DQ7L1W4 858 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 DHX37Q8IY37 1157 aaKnown RBP19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 PIGSQ96S52 555 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 ALG1Q9BT22 464 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 RIOX1Q9H6W3 641 aa19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 MAP3K20Q9NYL2 800 aaKnown RBP19.4■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 MYH7BA7E2Y1 1941 aa19.39■□□□□ 0.7
VPS9D1-AS1-201ENST00000562298 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CYTH3O43739 400 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SORBS3O60504 671 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CKBP12277 381 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 HOXD8P13378 290 aaPredicted RBP19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 SELPP16109 830 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 CHMLP26374 656 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TAP1Q03518 808 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TRDNQ13061 729 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MFSD10Q14728 455 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MYSM1Q5VVJ2 828 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 VSIG10LQ86VR7 867 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MICALL1Q8N3F8 863 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 C7orf31Q8N865 590 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 U3KPZ7 1027 aaPredicted RBP19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 MYO9BQ13459 2157 aa19.39■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 TNFRSF10AO00220 468 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 IFIT3O14879 490 aaKnown RBP19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 NBNO60934 754 aa19.38■□□□□ 0.69
VPS9D1-AS1-201ENST00000562298 WDR5P61964 334 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms