RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 RASIP1Q5U651 963 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 RNF20Q5VTR2 975 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PSRC1Q6PGN9 363 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 ZNF365Q70YC5 407 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 RRP36Q96EU6 259 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 FAM161BQ96MY7 647 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 GUCD1Q96NT3 240 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 MRVI1Q9Y6F6 885 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 MYH6P13533 1939 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 LAMA2P24043 3122 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CDC45O75419 566 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 RGS20O76081 388 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CALM1P0DP23 149 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CALM2P0DP24 149 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CALM3P0DP25 149 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CCL23P55773 120 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PTPN11Q06124 597 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 FAM47CQ5HY64 1035 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 FCHSD1Q86WN1 690 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 IL31RAQ8NI17 732 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 WNT8AQ9H1J5 351 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SEMA6BQ9H3T3 888 aa20.04■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CYP2C9P11712 490 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CCND2P30279 289 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 LAMC2Q13753 1193 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 KCNV1Q6PIU1 500 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SGMS1Q86VZ5 419 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SRBD1Q8N5C6 995 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PPP1R13LQ8WUF5 828 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 LRRC2Q9BYS8 371 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
MAP1LC3B-202ENST00000561823 TGFB3P10600 412 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 RXRAP19793 462 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 DGKDQ16760 1214 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 TSGA10IPQ3SY00 556 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 DHX37Q8IY37 1157 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PPTC7Q8NI37 304 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 HERVK_113Q902F9 699 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 KAT2BQ92831 832 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 TTYH1Q9H313 450 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SEC63Q9UGP8 760 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3B-202ENST00000561823 FRMPD4Q14CM0 1322 aa20.02■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 TMEM265A0A087WTH1 108 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 FGBP02675 491 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 MYSM1Q5VVJ2 828 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 RASEFQ8IZ41 740 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CMTR1Q8N1G2 835 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 BAZ2BQ9UIF8 2168 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-202ENST00000561823 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SP2Q02086 613 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CELF3Q5SZQ8 465 aaKnown RBP20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SESTD1Q86VW0 696 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 VWCEQ96DN2 955 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SCLYQ96I15 445 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 KIAA1217Q5T5P2 1943 aa20■□□□□ 0.79
MAP1LC3B-202ENST00000561823 PIK3CDO00329 1044 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 MEIS2O14770 477 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 STAM2O75886 525 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 HOXD8P13378 290 aaPredicted RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 DNAJB2P25686 324 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CHMP4BP1P59074 171 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 MRPS9P82933 396 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 TMTC3Q6ZXV5 915 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 DHX32Q7L7V1 743 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CUL5Q93034 780 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 ZFP91Q96JP5 570 aaPredicted RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CDX2Q99626 313 aaPredicted RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 MTIF3Q9H2K0 278 aaKnown RBP19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 COL6A3P12111 3177 aa19.99■□□□□ 0.79
MAP1LC3B-202ENST00000561823 PITPNM1O00562 1244 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 PPFIA4O75335 1185 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 GGPS1O95749 300 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 F2P00734 622 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 UBA1P22314 1058 aaKnown RBP19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 PTGISQ16647 500 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 ADCK5Q3MIX3 580 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 HSDL1Q3SXM5 330 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 APOA5Q6Q788 366 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SYNE3Q6ZMZ3 975 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 OTOP2Q7RTS6 562 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 MICU3Q86XE3 530 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SLC17A8Q8NDX2 589 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SMARCC2Q8TAQ2 1214 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 GPKOWQ92917 476 aaPredicted RBP eCLIP19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 SPATA33Q96N06 139 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 INPP4AQ96PE3 977 aaPredicted RBP19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 KATNAL1Q9BW62 490 aa19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 CXXC1Q9P0U4 656 aaPredicted RBP19.98■□□□□ 0.79
MAP1LC3B-202ENST00000561823 NOD1Q9Y239 953 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms