RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	ZNF236	Q9UL36	1845 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DNAJC25-GNG10	A0A024R161	153 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HSPA8	P11142	646 aa	Known RBP	11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FDPS	P14324	419 aa	Known RBP	11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	RGS2	P41220	211 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ADCY7	P51828	1080 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MAP2K5	Q13163	448 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	AP3B2	Q13367	1082 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	IRF5	Q13568	498 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PKN2	Q16513	984 aa	Known RBP	11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MORN1	Q5T089	497 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SWT1	Q5T5J6	900 aa	Known RBP	11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	WDR78	Q5VTH9	848 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DAGLB	Q8NCG7	672 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	TRIM47	Q96LD4	638 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ALG1	Q9BT22	464 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	EHMT1	Q9H9B1	1298 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	A1CF	Q9NQ94	594 aa	Known RBP	11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PRDM10	Q9NQV6	1147 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HOMER2	Q9NSB8	354 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CYP39A1	Q9NYL5	469 aa		11.36	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PCNT	O95613	3336 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	hCG_1642624	A0A1W2PR95	340 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SMCO2	A6NFE2	343 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NFIB	O00712	420 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FOXN1	O15353	648 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	JAK2	O60674	1132 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ADORA2A	P29274	412 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SLC4A3	P48751	1232 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NLRP5	P59047	1200 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	RPS6	P62753	249 aa	Known RBP	11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SAFB	Q15424	915 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MUM1L1	Q5H9M0	696 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NSMF	Q6X4W1	530 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DPP9	Q86TI2	863 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	USP6NL	Q92738	828 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	C8orf76	Q96K31	380 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PHF20	Q9BVI0	1012 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SRRD	Q9UH36	339 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PCDHA4	Q9UN74	947 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ADGRG1	Q9Y653	693 aa		11.35	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SPDYE3	A6NKU9	549 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	OPLAH	O14841	1288 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GPR37	O15354	613 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CFB	P00751	764 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GJB2	P29033	226 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	BAAT	Q14032	418 aa	Predicted RBP	11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	XRRA1	Q6P2D8	792 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	REXO1	Q8N1G1	1221 aa	Known RBP	11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FAM133A	Q8N9E0	248 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FBXO18	Q8NFZ0	1043 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CD99L2	Q8TCZ2	262 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PXYLP1	Q8TE99	480 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NSUN6	Q8TEA1	469 aa	Known RBP	11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	IWS1	Q96ST2	819 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	APBA2	Q99767	749 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	VPS54	Q9P1Q0	977 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GJD2	Q9UKL4	321 aa		11.34	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MYH6	P13533	1939 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	ASB14	A6NK59	587 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	MEIS2	O14770	477 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	PEX10	O60683	326 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	RNF40	O75150	1001 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	STAM2	O75886	525 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	MMP1	P03956	469 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	CLK2	P49760	499 aa	Known RBP	11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	ZNF792	Q3KQV3	632 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	OLFML2B	Q68BL8	750 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	MAMDC4	Q6UXC1	1216 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	BLID	Q8IZY5	108 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	NRBP1	Q9UHY1	535 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367	FRMPD4	Q14CM0	1322 aa		11.33	□□□□□ -0.6
KNSTRN-215	ENST00000561367		H3BQV1	296 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	CTGF	P29279	349 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	KRT2	P35908	639 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	FLT3LG	P49771	235 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	LBX1	P52954	281 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	LARP1B	Q659C4	914 aa	Known RBP	11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	KRT40	Q6A162	431 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	OTOP1	Q7RTM1	612 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	KRT25	Q7Z3Z0	450 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	CTU1	Q7Z7A3	348 aa	Known RBP	11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	MORC4	Q8TE76	937 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	RMDN3	Q96TC7	470 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	FOXP1	Q9H334	677 aa	Predicted RBP	11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	TRIM17	Q9Y577	477 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	SYNGAP1	Q96PV0	1343 aa		11.32	□□□□□ -0.6
KNSTRN-215	ENST00000561367	PLXNB2	O15031	1838 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	COBL	O75128	1261 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	PPFIA3	O75145	1194 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	PRKCZ	Q05513	592 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	ARHGEF16	Q5VV41	709 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	SLC30A10	Q6XR72	485 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	RAET1E	Q8TD07	263 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	MAML3	Q96JK9	1138 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	AIFM3	Q96NN9	605 aa		11.31	□□□□□ -0.6
KNSTRN-215	ENST00000561367	NAP1L4	Q99733	375 aa	Known RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms