RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 TRDNQ13061 729 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 ARHGEF16Q5VV41 709 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 CHST3Q7LGC8 479 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 IL31RAQ8NI17 732 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 PDCD2LQ9BRP1 358 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 MTIF3Q9H2K0 278 aaKnown RBP20.8■□□□□ 0.92
RPL28-210ENST00000560583 DDX41Q9UJV9 622 aaKnown RBP20.8■□□□□ 0.92
RPL28-210ENST00000560583 MYO9BQ13459 2157 aa20.8■□□□□ 0.92
RPL28-210ENST00000560583 DOCK5Q9H7D0 1870 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 IFIT3O14879 490 aaKnown RBP20.79■□□□□ 0.92
RPL28-210ENST00000560583 RAB30Q15771 203 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 HOMER1Q86YM7 354 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 MB21D2Q8IYB1 491 aaPredicted RBP20.79■□□□□ 0.92
RPL28-210ENST00000560583 PIGSQ96S52 555 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 NKX2-4Q9H2Z4 354 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 PRDM12Q9H4Q4 367 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 PCDHA1Q9Y5I3 950 aa20.79■□□□□ 0.92
RPL28-210ENST00000560583 PITPNM1O00562 1244 aa20.78■□□□□ 0.92
RPL28-210ENST00000560583 EIF3JO75822 258 aaKnown RBP20.78■□□□□ 0.92
RPL28-210ENST00000560583 HOXA13P31271 388 aaPredicted RBP20.78■□□□□ 0.92
RPL28-210ENST00000560583 RABGGTBP53611 331 aa20.78■□□□□ 0.92
RPL28-210ENST00000560583 DEFB128Q7Z7B8 93 aa20.78■□□□□ 0.92
RPL28-210ENST00000560583 RPUSD2Q8IZ73 545 aaKnown RBP20.78■□□□□ 0.92
RPL28-210ENST00000560583 NCOA7Q8NI08 942 aa20.78■□□□□ 0.92
RPL28-210ENST00000560583 MAP4K1Q92918 833 aa20.78■□□□□ 0.92
RPL28-210ENST00000560583 EMID1Q96A84 441 aaPredicted RBP20.78■□□□□ 0.92
RPL28-210ENST00000560583 PFKMP08237 780 aa20.77■□□□□ 0.92
RPL28-210ENST00000560583 COL9A3Q14050 684 aaPredicted RBP20.77■□□□□ 0.92
RPL28-210ENST00000560583 WTAPQ15007 396 aa20.77■□□□□ 0.92
RPL28-210ENST00000560583 GDF6Q6KF10 455 aaPredicted RBP20.77■□□□□ 0.92
RPL28-210ENST00000560583 RALYLQ86SE5 291 aaKnown RBP20.77■□□□□ 0.92
RPL28-210ENST00000560583 SESTD1Q86VW0 696 aa20.77■□□□□ 0.92
RPL28-210ENST00000560583 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
RPL28-210ENST00000560583 MRVI1Q9Y6F6 885 aa20.77■□□□□ 0.92
RPL28-210ENST00000560583 SLC4A7Q9Y6M7 1214 aa20.77■□□□□ 0.92
RPL28-210ENST00000560583 ZBBXA8MT70 800 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 IQCF3P0C7M6 154 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 MYOGP15173 224 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 CHMP4BP1P59074 171 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 ADGRE1Q14246 886 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 PGM5Q15124 567 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 IGDCC4Q8TDY8 1250 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 DHX38Q92620 1227 aaKnown RBP20.76■□□□□ 0.91
RPL28-210ENST00000560583 MAP3K20Q9NYL2 800 aaKnown RBP20.76■□□□□ 0.91
RPL28-210ENST00000560583 MSRAQ9UJ68 235 aa20.76■□□□□ 0.91
RPL28-210ENST00000560583 RBAK-RBAKDNI3L0D1 243 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 HOXD8P13378 290 aaPredicted RBP20.75■□□□□ 0.91
RPL28-210ENST00000560583 RFC2P35250 354 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 PTGISQ16647 500 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 TMEM67Q5HYA8 995 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 PPTC7Q8NI37 304 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 FRMPD4Q14CM0 1322 aa20.75■□□□□ 0.91
RPL28-210ENST00000560583 COL4A4P53420 1690 aaPredicted RBP20.74■□□□□ 0.91
RPL28-210ENST00000560583 ERICH2A1L162 156 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 F2P00734 622 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 MYCLP12524 364 aaPredicted RBP20.74■□□□□ 0.91
RPL28-210ENST00000560583 ATP2A2P16615 1042 aaKnown RBP20.74■□□□□ 0.91
RPL28-210ENST00000560583 CASTP20810 708 aaKnown RBP20.74■□□□□ 0.91
RPL28-210ENST00000560583 GPNMBQ14956 572 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 DGKDQ16760 1214 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 VSIG10LQ86VR7 867 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 SAMD3Q8N6K7 520 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 GPKOWQ92917 476 aaPredicted RBP eCLIP20.74■□□□□ 0.91
RPL28-210ENST00000560583 ZFP91Q96JP5 570 aaPredicted RBP20.74■□□□□ 0.91
RPL28-210ENST00000560583 LY9Q9HBG7 655 aa20.74■□□□□ 0.91
RPL28-210ENST00000560583 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 HAS3O00219 553 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
RPL28-210ENST00000560583 PSEN2P49810 448 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 SP2Q02086 613 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 BFSP2Q13515 415 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
RPL28-210ENST00000560583 GAS2L1Q99501 681 aaPredicted RBP20.73■□□□□ 0.91
RPL28-210ENST00000560583 MYL10Q9BUA6 226 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 LSG1Q9H089 658 aaKnown RBP20.73■□□□□ 0.91
RPL28-210ENST00000560583 SLC28A3Q9HAS3 691 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 PRDM6Q9NQX0 595 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 HDAC6Q9UBN7 1215 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 GTF2IRD1Q9UHL9 959 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 NOD1Q9Y239 953 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 PCDHA11Q9Y5I1 949 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 TRANK1O15050 2925 aa20.73■□□□□ 0.91
RPL28-210ENST00000560583 REV3LO60673 3130 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
RPL28-210ENST00000560583 SORBS3O60504 671 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 RBL2Q08999 1139 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 LAMC2Q13753 1193 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 MFSD10Q14728 455 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 HSDL1Q3SXM5 330 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 CATIPQ7Z7H3 387 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
RPL28-210ENST00000560583 ZNF654Q8IZM8 581 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 RETREG2Q8NC44 543 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
RPL28-210ENST00000560583 TTC28Q96AY4 2481 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms