RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
SPG21-211ENST00000560564 KPNA6O60684 536 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 CDC45O75419 566 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 GH1P01241 217 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 MMP3P08254 477 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 KIF5BP33176 963 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.59
SPG21-211ENST00000560564 PGM5Q15124 567 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 NBPF20Q3BBV1 942 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 TSGA10IPQ3SY00 556 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 BRDTQ58F21 947 aaPredicted RBP18.75■□□□□ 0.59
SPG21-211ENST00000560564 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 RASEFQ8IZ41 740 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 TMEM199Q8N511 208 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 SRBD1Q8N5C6 995 aaKnown RBP18.75■□□□□ 0.59
SPG21-211ENST00000560564 GUCD1Q96NT3 240 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 LRRC2Q9BYS8 371 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 HIPK3Q9H422 1215 aa18.75■□□□□ 0.59
SPG21-211ENST00000560564 DOCK5Q9H7D0 1870 aa18.74■□□□□ 0.59
SPG21-211ENST00000560564 RXRAP19793 462 aa18.74■□□□□ 0.59
SPG21-211ENST00000560564 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
SPG21-211ENST00000560564 KAT2BQ92831 832 aa18.74■□□□□ 0.59
SPG21-211ENST00000560564 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
SPG21-211ENST00000560564 GBF1Q92538 1859 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 CHD7Q9P2D1 2997 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 ACRP10323 421 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 HOXD8P13378 290 aaPredicted RBP18.73■□□□□ 0.59
SPG21-211ENST00000560564 EXOSC10Q01780 885 aaKnown RBP18.73■□□□□ 0.59
SPG21-211ENST00000560564 PPP1R13LQ8WUF5 828 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 STXBP5LQ9Y2K9 1186 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 VCANP13611 3396 aa18.73■□□□□ 0.59
SPG21-211ENST00000560564 CYP2C9P11712 490 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 MYCLP12524 364 aaPredicted RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 GNAQP50148 359 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 PTPN11Q06124 597 aaPredicted RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 PSRC1Q6PGN9 363 aaPredicted RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 FCHSD1Q86WN1 690 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 RRP36Q96EU6 259 aaKnown RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 NEK1Q96PY6 1258 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
SPG21-211ENST00000560564 TTYH1Q9H313 450 aaPredicted RBP18.72■□□□□ 0.59
SPG21-211ENST00000560564 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 MEIS2O14770 477 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
SPG21-211ENST00000560564 CALM1P0DP23 149 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 CALM2P0DP24 149 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 CALM3P0DP25 149 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 CCL23P55773 120 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 MRPS9P82933 396 aaKnown RBP18.71■□□□□ 0.59
SPG21-211ENST00000560564 SP2Q02086 613 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 ZNF697Q5TEC3 545 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 SESTD1Q86VW0 696 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
SPG21-211ENST00000560564 ZFP91Q96JP5 570 aaPredicted RBP18.71■□□□□ 0.59
SPG21-211ENST00000560564 SLC12A7Q9Y666 1083 aa18.71■□□□□ 0.59
SPG21-211ENST00000560564 SUPT20HL2P0C7V6 817 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
SPG21-211ENST00000560564 CCND2P30279 289 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 LAMC2Q13753 1193 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 FAM47CQ5HY64 1035 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 FANCBQ8NB91 859 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 PPTC7Q8NI37 304 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 KCNB2Q92953 911 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 FAM161BQ96MY7 647 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 INPP4AQ96PE3 977 aaPredicted RBP18.7■□□□□ 0.58
SPG21-211ENST00000560564 SEMA6BQ9H3T3 888 aa18.7■□□□□ 0.58
SPG21-211ENST00000560564 CXXC1Q9P0U4 656 aaPredicted RBP18.7■□□□□ 0.58
SPG21-211ENST00000560564 TMEM265A0A087WTH1 108 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
SPG21-211ENST00000560564 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
SPG21-211ENST00000560564 HAS3O00219 553 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 F2P00734 622 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 TGFB3P10600 412 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
SPG21-211ENST00000560564 SEMA3FQ13275 785 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 DGKDQ16760 1214 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 CELF3Q5SZQ8 465 aaKnown RBP18.69■□□□□ 0.58
SPG21-211ENST00000560564 KCNV1Q6PIU1 500 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 DHX32Q7L7V1 743 aaKnown RBP18.69■□□□□ 0.58
SPG21-211ENST00000560564 MICU3Q86XE3 530 aa18.69■□□□□ 0.58
SPG21-211ENST00000560564 HERVK_113Q902F9 699 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms