RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
LYSMD2-204ENST00000560491 REXO1Q8N1G1 1221 aaKnown RBP17.77■□□□□ 0.44
LYSMD2-204ENST00000560491 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
LYSMD2-204ENST00000560491 GLT8D2Q9H1C3 349 aa17.77■□□□□ 0.44
LYSMD2-204ENST00000560491 OGDHLQ9ULD0 1010 aa17.77■□□□□ 0.44
LYSMD2-204ENST00000560491 SMPD1P17405 629 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 TNFAIP2Q03169 654 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 NPY5RQ15761 445 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 WASF1Q92558 559 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
LYSMD2-204ENST00000560491 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 EIF3JO75822 258 aaKnown RBP17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 RGS20O76081 388 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 ARIH2O95376 493 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 PGK1P00558 417 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 AP3B2Q13367 1082 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 PCNX4Q63HM2 1172 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 TEX2Q8IWB9 1127 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 PHF20Q9BVI0 1012 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 WDR11Q9BZH6 1224 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 RTEL1Q9NZ71 1219 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 GNEQ9Y223 722 aaKnown RBP17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 DOCK5Q9H7D0 1870 aa17.75■□□□□ 0.43
LYSMD2-204ENST00000560491 MYADML2A6NDP7 307 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 DUSP11O75319 330 aaKnown RBP17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 FOSP01100 380 aaPredicted RBP17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 IQSEC1Q6DN90 963 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 COPS5Q92905 334 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
LYSMD2-204ENST00000560491 MKI67P46013 3256 aaKnown RBP17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 ADAMTS4O75173 837 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 FARP2O94887 1054 aaPredicted RBP17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 XBP1P17861 261 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 SREBF1P36956 1147 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 TTLL4Q14679 1199 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 DUSP28Q4G0W2 176 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 CCDC62Q6P9F0 684 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 FAM177A1Q8N128 213 aaPredicted RBP17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 OXER1Q8TDS5 423 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 MRVI1Q9Y6F6 885 aa17.73■□□□□ 0.43
LYSMD2-204ENST00000560491 M0R2N6 131 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 GUCY1B3Q02153 619 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 LRRC41Q15345 812 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 ANKLE1Q8NAG6 615 aa17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 UPF3AQ9H1J1 476 aaKnown RBP17.72■□□□□ 0.43
LYSMD2-204ENST00000560491 DYNC1LI2O43237 492 aaPredicted RBP17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 SORBS3O60504 671 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 STAM2O75886 525 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 C6orf222P0C671 652 aaPredicted RBP17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 ITGB5P18084 799 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 GJA9P57773 515 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 SEMA3FQ13275 785 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 KRT40Q6A162 431 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 XRRA1Q6P2D8 792 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 PAWRQ96IZ0 340 aaKnown RBP17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 DDX41Q9UJV9 622 aaKnown RBP17.71■□□□□ 0.43
LYSMD2-204ENST00000560491 DNM1LO00429 736 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 CTAGE5O15320 804 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 MMP1P03956 469 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 BEX3Q00994 111 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 CUL4AQ13619 759 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 TRIM29Q14134 588 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 MCTP2Q6DN12 878 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 UBE2Q1Q7Z7E8 422 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 RNF180Q86T96 592 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 KLHDC9Q8NEP7 349 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 CYP2W1Q8TAV3 490 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 CRYGNQ8WXF5 182 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 AP5M1Q9H0R1 490 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
LYSMD2-204ENST00000560491 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 FIBPO43427 364 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 GJB2P29033 226 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 ICAM3P32942 547 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 KRT2P35908 639 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms