RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 STXBP3O00186 592 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 NBNO60934 754 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 RAB11FIP3O75154 756 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 SLC3A2P08195 630 aaKnown RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 SMAD2Q15796 467 aaKnown RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 IER5LQ5T953 404 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 GDF6Q6KF10 455 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 GIMAP6Q6P9H5 292 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 KCTD1Q719H9 257 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 BMP8AQ7Z5Y6 402 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 COPS5Q92905 334 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 FAM86C1Q9NVL1 165 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 PRR12Q9ULL5 1215 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 MYH7P12883 1935 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 EMSYQ7Z589 1322 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 PLA2G6O60733 806 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 LGR5O75473 907 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 ICAM1P05362 532 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 CCDC96Q2M329 555 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 RNF207Q6ZRF8 634 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 TRIM67Q6ZTA4 783 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 FBXO11Q86XK2 927 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 TMEM192Q8IY95 271 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 KATNAL1Q9BW62 490 aa10.93□□□□□ -0.66
SMAD3-215ENST00000560424 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 MBTPS2O43462 519 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 UPP2O95045 317 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 CHGBP05060 677 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 ATP5JP18859 108 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 PDE4AP27815 886 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 TFAP4Q01664 338 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 RBL2Q08999 1139 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 TCF15Q12870 199 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 PTK7Q13308 1070 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
SMAD3-215ENST00000560424 GPNMBQ14956 572 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 RCSD1Q6JBY9 416 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMAD3-215ENST00000560424 CHST3Q7LGC8 479 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 DHX37Q8IY37 1157 aaKnown RBP10.92□□□□□ -0.66
SMAD3-215ENST00000560424 FBXL6Q8N531 539 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 DHX38Q92620 1227 aaKnown RBP10.92□□□□□ -0.66
SMAD3-215ENST00000560424 STRBPQ96SI9 672 aaKnown RBP10.92□□□□□ -0.66
SMAD3-215ENST00000560424 HAUS7Q99871 368 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 GTF2IRD1Q9UHL9 959 aa10.92□□□□□ -0.66
SMAD3-215ENST00000560424 PLIN4Q96Q06 1357 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 ZDBF2Q9HCK1 2354 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 GSG1L2A8MUP6 293 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 NFIBO00712 420 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 GH1P01241 217 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 MMP3P08254 477 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 GNAT2P19087 354 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 CTNNB1P35222 781 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 NDUFV1P49821 464 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-215ENST00000560424 DGKDQ16760 1214 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 ZNF618Q5T7W0 954 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 SLC30A10Q6XR72 485 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 DNERQ8NFT8 737 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
SMAD3-215ENST00000560424 AFG1LQ8WV93 481 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 NACAP1Q9BZK3 213 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 LRRCC1Q9C099 1032 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 OSBPL3Q9H4L5 887 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 IGFLR1Q9H665 355 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 CD207Q9UJ71 328 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 PNMA2Q9UL42 364 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 LCTP09848 1927 aa10.91□□□□□ -0.66
SMAD3-215ENST00000560424 TSPY2A6NKD2 308 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 CSPG5O95196 566 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 COL19A1Q14993 1142 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 ERMP1Q7Z2K6 904 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 DBF4BQ8NFT6 615 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 C11orf84Q9BUA3 381 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-215ENST00000560424 LNPKQ9C0E8 428 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 LMAN2LQ9H0V9 348 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-215ENST00000560424 RWDD3Q9Y3V2 267 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 TECTAO75443 2155 aa10.9□□□□□ -0.66
SMAD3-215ENST00000560424 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 GPAA1O43292 621 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 KDM4AO75164 1064 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 LTBRP36941 435 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 THPOP40225 353 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 PSEN2P49810 448 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 ZXDAP98168 799 aa10.89□□□□□ -0.67
SMAD3-215ENST00000560424 SIGLEC14Q08ET2 396 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms