RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 MMP1P03956 469 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 CYP3A4P08684 503 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 TAL1P17542 331 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 KRT2P35908 639 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 TNFAIP2Q03169 654 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 GPRASP2Q96D09 838 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 KATNBL1Q9H079 304 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
RABGGTA-215ENST00000560207 FIBPO43427 364 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 ICAM3P32942 547 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 NKX3-2P78367 333 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 ST3GAL1Q11201 340 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 MOXD1Q6UVY6 613 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 RNF180Q86T96 592 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 PCSK9Q8NBP7 692 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 U2AF1L4Q8WU68 220 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 WDR11Q9BZH6 1224 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 CRISPLD2Q9H0B8 497 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
RABGGTA-215ENST00000560207 ZEB2O60315 1214 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 JAK2O60674 1132 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 KPNA6O60684 536 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 GCFC2P16383 781 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 ZNF76P36508 570 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 SETQ01105 290 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 NEDD9Q14511 834 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 MTFR1Q15390 333 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 UBE2SQ16763 222 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 JAKMIP3Q5VZ66 844 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 KRT40Q6A162 431 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 SEZ6LQ9BYH1 1024 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
RABGGTA-215ENST00000560207 H3BQV1 296 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 M0R2N6 131 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 GJB2P29033 226 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 CIITAP33076 1130 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 CPT1AP50416 773 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 TRIM32Q13049 653 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 ORC2Q13416 577 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 CEP55Q53EZ4 464 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 LHX8Q68G74 356 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 FBXO16Q8IX29 292 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 TRPV1Q8NER1 839 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 JADE2Q9NQC1 790 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 UBIAD1Q9Y5Z9 338 aa13.73□□□□□ -0.21
RABGGTA-215ENST00000560207 CCDC85CA6NKD9 419 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 SPATA31C2B4DYI2 1134 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 DNM1LO00429 736 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 MEIS1O00470 390 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 PPFIA3O75145 1194 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 GH1P01241 217 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 CST5P28325 142 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 GJA9P57773 515 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 MTMR1Q13613 665 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 SEPT14Q6ZU15 432 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 MXRA8Q9BRK3 442 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 UPF3AQ9H1J1 476 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 KCNJ14Q9UNX9 436 aa13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-215ENST00000560207 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 MOXD2PA6NHM9 499 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 KBTBD13C9JR72 458 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 CABYRO75952 493 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 CYP3A7P24462 503 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 ADCYAP1R1P41586 468 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 NPY5RQ15761 445 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms