RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 DHX32Q7L7V1 743 aaKnown RBP7.3□□□□□ -1.24
CLPX-206ENST00000560166 SYT9Q86SS6 491 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 NIM1KQ8IY84 436 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 CERS5Q8N5B7 392 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 AGBL3Q8NEM8 1001 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 EDEM1Q92611 657 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 TEKT1Q969V4 418 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 CHMP4CQ96CF2 233 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 ZDHHC15Q96MV8 337 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 JAKMIP1Q96N16 626 aaKnown RBP7.3□□□□□ -1.24
CLPX-206ENST00000560166 NEK1Q96PY6 1258 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 ZIC5Q96T25 663 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
CLPX-206ENST00000560166 AGXT2Q9BYV1 514 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 DBNDD1Q9H9R9 158 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
CLPX-206ENST00000560166 ROBO3Q96MS0 1386 aa7.3□□□□□ -1.24
CLPX-206ENST00000560166 E7EWF7 191 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 IGHA2P01877 340 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 APPP05067 770 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 SLC3A2P08195 630 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 CASTP20810 708 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 TDO2P48775 406 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 EVCP57679 992 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 RHBDL3P58872 404 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 TRDNQ13061 729 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 USP50Q70EL3 339 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 CTU1Q7Z7A3 348 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 AMOTL1Q8IY63 956 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 MIGA1Q8NAN2 632 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 NCOA7Q8NI08 942 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 STAG1Q8WVM7 1258 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 TP53INP1Q96A56 240 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 LENG1Q96BZ8 264 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 INTS4Q96HW7 963 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 ZSCAN31Q96LW9 406 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 GMLQ99445 158 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 GLIS2Q9BZE0 524 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 UPF3BQ9BZI7 483 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 KRT23Q9C075 422 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 DCP1AQ9NPI6 582 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 PDRG1Q9NUG6 133 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 TTF2Q9UNY4 1162 aaKnown RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 DAGLAQ9Y4D2 1042 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
CLPX-206ENST00000560166 MYH7P12883 1935 aa7.29□□□□□ -1.24
CLPX-206ENST00000560166 TRPM7Q96QT4 1865 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 YDJCA8MPS7 323 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 ORC4O43929 436 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 TRPA1O75762 1119 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 MCM5P33992 734 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 BTDP43251 543 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 RCAN1P53805 252 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 HUNKP57058 714 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 NRG1Q02297 640 aaPredicted RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 PPARAQ07869 468 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 FZD5Q13467 585 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 CUL4AQ13619 759 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 TNIP1Q15025 636 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 GRIK5Q16478 980 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 ADCK5Q3MIX3 580 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 AKNAD1Q5T1N1 836 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 FKBP1CQ5VVH2 108 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 C8orf86Q6ZUL3 223 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 STOX1Q6ZVD7 989 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 RALYLQ86SE5 291 aaKnown RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 MB21D2Q8IYB1 491 aaPredicted RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 DUSP9Q99956 384 aaKnown RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 ZNF287Q9HBT7 754 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 CWC22Q9HCG8 908 aaKnown RBP7.28□□□□□ -1.24
CLPX-206ENST00000560166 RNF19AQ9NV58 838 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 AATFQ9NY61 560 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLPX-206ENST00000560166 PARP2Q9UGN5 583 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 HDAC9Q9UKV0 1011 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 LIMCH1Q9UPQ0 1083 aa7.28□□□□□ -1.24
CLPX-206ENST00000560166 PRKAB2O43741 272 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 ALBP02768 609 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 MZF1P28698 734 aaPredicted RBP7.27□□□□□ -1.25
CLPX-206ENST00000560166 TXLNAP40222 546 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 CRKP46108 304 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 FXR1P51114 621 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLPX-206ENST00000560166 DYNLL1P63167 89 aaKnown RBP7.27□□□□□ -1.25
CLPX-206ENST00000560166 MRPL58Q14197 206 aaKnown RBP7.27□□□□□ -1.25
CLPX-206ENST00000560166 C12orf60Q5U649 245 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 APOBEC3HQ6NTF7 200 aaKnown RBP7.27□□□□□ -1.25
CLPX-206ENST00000560166 CTR9Q6PD62 1173 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 MFSD6Q6ZSS7 791 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 TBC1D10CQ8IV04 446 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 TEX11Q8IYF3 940 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 SH3RF3Q8TEJ3 882 aaPredicted RBP7.27□□□□□ -1.25
CLPX-206ENST00000560166 DPF2Q92785 391 aa7.27□□□□□ -1.25
CLPX-206ENST00000560166 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms