RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
SNX1-209ENST00000559961 SCLYQ96I15 445 aa14.56□□□□□ -0.08
SNX1-209ENST00000559961 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
SNX1-209ENST00000559961 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
SNX1-209ENST00000559961 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
SNX1-209ENST00000559961 LAMA3Q16787 3333 aa14.56□□□□□ -0.08
SNX1-209ENST00000559961 PARNO95453 639 aaKnown RBP14.55□□□□□ -0.08
SNX1-209ENST00000559961 MMP3P08254 477 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 TGFB3P10600 412 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 ATP2A2P16615 1042 aaKnown RBP14.55□□□□□ -0.08
SNX1-209ENST00000559961 MCM5P33992 734 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 HSD17B4P51659 736 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 RASIP1Q5U651 963 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 CCDC62Q6P9F0 684 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 SYNE3Q6ZMZ3 975 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 FCHSD1Q86WN1 690 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 CAGE1Q8TC20 777 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 SYMPKQ92797 1274 aaKnown RBP14.55□□□□□ -0.08
SNX1-209ENST00000559961 MAP4K1Q92918 833 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 PIGSQ96S52 555 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 MLXIPQ9HAP2 919 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
SNX1-209ENST00000559961 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
SNX1-209ENST00000559961 GRXCR1A8MXD5 290 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 NOP56O00567 594 aaKnown RBP14.54□□□□□ -0.08
SNX1-209ENST00000559961 ARIH2O95376 493 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 CALM1P0DP23 149 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 CALM2P0DP24 149 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 CALM3P0DP25 149 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 IGFBP4P22692 258 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
SNX1-209ENST00000559961 KCNJ6P48051 423 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 ARHGAP1Q07960 439 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 RNF20Q5VTR2 975 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 PPTC7Q8NI37 304 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 SMARCC2Q8TAQ2 1214 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 AFAP1L1Q8TED9 768 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 PIBF1Q8WXW3 757 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 SPATA33Q96N06 139 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 MAP3K14Q99558 947 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 PDCD2LQ9BRP1 358 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 MTA3Q9BTC8 594 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 COL20A1Q9P218 1284 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
SNX1-209ENST00000559961 RBM8AQ9Y5S9 174 aaKnown RBP14.54□□□□□ -0.08
SNX1-209ENST00000559961 MCM3APO60318 1980 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 PPFIA4O75335 1185 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 STAM2O75886 525 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 DDAH1O94760 285 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 PBX2P40425 430 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 PSEN2P49810 448 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 PPP2R2DQ66LE6 453 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 VSIG10LQ86VR7 867 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 EMID1Q96A84 441 aaPredicted RBP14.53□□□□□ -0.08
SNX1-209ENST00000559961 MTMR8Q96EF0 704 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 TMEM87BQ96K49 555 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 ALG1Q9BT22 464 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 IL25Q9H293 177 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 NKX2-4Q9H2Z4 354 aa14.53□□□□□ -0.08
SNX1-209ENST00000559961 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
SNX1-209ENST00000559961 PRC1O43663 620 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 IQCF3P0C7M6 154 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 TROAPQ12815 778 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 MFSD10Q14728 455 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 PGM5Q15124 567 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 SESTD1Q86VW0 696 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 PHOSPHO2Q8TCD6 241 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 PPM1EQ8WY54 764 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 SLC9A7Q96T83 725 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 ZBED2Q9BTP6 218 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 ANO2Q9NQ90 1003 aa14.52□□□□□ -0.09
SNX1-209ENST00000559961 GTPBP6O43824 516 aaPredicted RBP14.51□□□□□ -0.09
SNX1-209ENST00000559961 BAIAP3O94812 1187 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 GGPS1O95749 300 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 SELPP16109 830 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 GHRHRQ02643 423 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 NEDD9Q14511 834 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 KIAA0753Q2KHM9 967 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 CELF3Q5SZQ8 465 aaKnown RBP14.51□□□□□ -0.09
SNX1-209ENST00000559961 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 ZNF654Q8IZM8 581 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 IGDCC4Q8TDY8 1250 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 SLC12A7Q9Y666 1083 aa14.51□□□□□ -0.09
SNX1-209ENST00000559961 EFCAB14O75071 495 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 GNAT1P11488 350 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 XRRA1Q6P2D8 792 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 MB21D2Q8IYB1 491 aaPredicted RBP14.5□□□□□ -0.09
SNX1-209ENST00000559961 GIMAP8Q8ND71 665 aaPredicted RBP14.5□□□□□ -0.09
SNX1-209ENST00000559961 PPP1R13LQ8WUF5 828 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 EHMT1Q9H9B1 1298 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 HDAC6Q9UBN7 1215 aa14.5□□□□□ -0.09
SNX1-209ENST00000559961 GTF2IRD1Q9UHL9 959 aa14.5□□□□□ -0.09
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