RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 NPLOC4Q8TAT6 608 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 MYCLP12524 364 aaPredicted RBP13.16□□□□□ -0.3
TM2D3-208ENST00000559891 PTPREP23469 700 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 SREBF1P36956 1147 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 PSMC4P43686 418 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
TM2D3-208ENST00000559891 GRIN1Q05586 938 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 EEPD1Q7L9B9 569 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 PLEKHH3Q7Z736 793 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 RPTORQ8N122 1335 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
TM2D3-208ENST00000559891 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
TM2D3-208ENST00000559891 PTGS1P23219 599 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.3
TM2D3-208ENST00000559891 PTPAQ15257 358 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 CCL14Q16627 93 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 ARHGEF16Q5VV41 709 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 GABRQQ9UN88 632 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 RGS20O76081 388 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 NR3C2P08235 984 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 ITGB5P18084 799 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 MAPK4P31152 587 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 ALDH5A1P51649 535 aaPredicted RBP13.15□□□□□ -0.3
TM2D3-208ENST00000559891 UBE2HP62256 183 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 SP3Q02447 781 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 GRB14Q14449 540 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
TM2D3-208ENST00000559891 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 GLT8D2Q9H1C3 349 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
TM2D3-208ENST00000559891 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 GJD2Q9UKL4 321 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
TM2D3-208ENST00000559891 MGAMO43451 1857 aa13.15□□□□□ -0.31
TM2D3-208ENST00000559891 PFASO15067 1338 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 UQCRHLA0A096LP55 91 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 GPR25O00155 361 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
TM2D3-208ENST00000559891 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
TM2D3-208ENST00000559891 UQCRHP07919 91 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
TM2D3-208ENST00000559891 CYP2B6P20813 491 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 IL17AQ16552 155 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 MORN1Q5T089 497 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
TM2D3-208ENST00000559891 LENG9Q96B70 501 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
TM2D3-208ENST00000559891 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 ARP10275 920 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 PTGDRQ13258 359 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 PRR16Q569H4 304 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 PKD2L1Q9P0L9 805 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 SORBS3O60504 671 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
TM2D3-208ENST00000559891 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
TM2D3-208ENST00000559891 STRNO43815 780 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 COPB2P35606 906 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 PRKCZQ05513 592 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 USP6NLQ92738 828 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 HAS1Q92839 578 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
TM2D3-208ENST00000559891 SLC15A5A6NIM6 579 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 CYP3A4P08684 503 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 ZNF76P36508 570 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 USP11P51784 963 aa13.12□□□□□ -0.31
TM2D3-208ENST00000559891 KRT85P78386 507 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms