RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ERVFRD-1P60508 538 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 SSRP1Q08945 709 aaKnown RBP5.11□□□□□ -1.59
CASC4-210ENST00000559550 BMS1Q14692 1282 aaKnown RBP5.11□□□□□ -1.59
CASC4-210ENST00000559550 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 CNKSR3Q6P9H4 555 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 LRP10Q7Z4F1 713 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 PPIL6Q8IXY8 311 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 LRRC47Q8N1G4 583 aaKnown RBP5.11□□□□□ -1.59
CASC4-210ENST00000559550 NLGN2Q8NFZ4 835 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 UBXN4Q92575 508 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 MKL1Q969V6 931 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 DNAJC7Q99615 494 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 MTA3Q9BTC8 594 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 LNPKQ9C0E8 428 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 PDLIM7Q9NR12 457 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 SIRT5Q9NXA8 310 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 TRBV23OR9-2A0A075B6M9 112 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 A0A1W2PQ27 194 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 A0A1W2PQ64 194 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 A0A1W2PQC6 194 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 A0A1W2PQD8 194 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 BLACEA4D250 179 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 NUDT19A8MXV4 375 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 FAM153BP0C7A2 387 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 FGFR1P11362 822 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 PABPC1P11940 636 aaKnown RBP5.1□□□□□ -1.59
CASC4-210ENST00000559550 ARL4AP40617 200 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 CORO7P57737 925 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 YBX1P67809 324 aaKnown RBP5.1□□□□□ -1.59
CASC4-210ENST00000559550 MAP4K2Q12851 820 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 TESK1Q15569 626 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 NTRK3Q16288 839 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 CCDC144BQ3MJ40 725 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 ACBD5Q5T8D3 534 aaPredicted RBP5.1□□□□□ -1.59
CASC4-210ENST00000559550 BICRALQ6AI39 1079 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 NSMFQ6X4W1 530 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 RXFP1Q9HBX9 757 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 KLHL14Q9P2G3 628 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 FBXL7Q9UJT9 491 aa5.1□□□□□ -1.59
CASC4-210ENST00000559550 CDK11AQ9UQ88 783 aaPredicted RBP5.1□□□□□ -1.59
CASC4-210ENST00000559550 KDM2BQ8NHM5 1336 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 TRAV20A0A0B4J274 112 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 MEFVO15553 781 aaPredicted RBP5.09□□□□□ -1.59
CASC4-210ENST00000559550 NPHS1O60500 1241 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 DBHP09172 617 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 IFRD2Q12894 506 aaPredicted RBP5.09□□□□□ -1.59
CASC4-210ENST00000559550 FAM209AQ5JX71 171 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 E4F1Q66K89 784 aaPredicted RBP5.09□□□□□ -1.59
CASC4-210ENST00000559550 RPTNQ6XPR3 784 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 NLRP10Q86W26 655 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 IGDCC3Q8IVU1 814 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 LILRB2Q8N423 598 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 LZTR1Q8N653 840 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 ZBTB38Q8NAP3 1195 aaPredicted RBP5.09□□□□□ -1.59
CASC4-210ENST00000559550 RCBTB1Q8NDN9 531 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 MZB1Q8WU39 189 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 KCTD13Q8WZ19 329 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 DIO2Q92813 273 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 SORCS2Q96PQ0 1159 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 PIF1Q9H611 641 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 ZSWIM4Q9H7M6 989 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 BTG4Q9NY30 223 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 HCFC2Q9Y5Z7 792 aa5.09□□□□□ -1.59
CASC4-210ENST00000559550 FUCA1P04066 466 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 MPOP05164 745 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 GLI4P10075 376 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 LTBRP36941 435 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 MAGEA10P43363 369 aaPredicted RBP5.08□□□□□ -1.6
CASC4-210ENST00000559550 ADAM17P78536 824 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 KCNAB2Q13303 367 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 RAB3GAP1Q15042 981 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 DPH6Q7L8W6 267 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 TEX2Q8IWB9 1127 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 PLEKHO2Q8TD55 490 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 MARCH2Q9P0N8 246 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 PLA2G2DQ9UNK4 145 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 NPFFR2Q9Y5X5 522 aa5.08□□□□□ -1.6
CASC4-210ENST00000559550 A0A1W2PQJ5 194 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 K7ESM1 405 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 FFAR3O14843 346 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 SRGAP3O43295 1099 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 MSCO60682 206 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 FPR2P25090 351 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 BCL6P41182 706 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 CAP1Q01518 475 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 PLEKHN1Q494U1 663 aaPredicted RBP5.07□□□□□ -1.6
CASC4-210ENST00000559550 IQCEQ6IPM2 695 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 KCNT2Q6UVM3 1135 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 JMYQ8N9B5 988 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 PHF20Q9BVI0 1012 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 WDR26Q9H7D7 661 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.07□□□□□ -1.61e-14■■■■□ 26
CASC4-210ENST00000559550 SRRDQ9UH36 339 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 PCDHA2Q9Y5H9 948 aa5.07□□□□□ -1.6
CASC4-210ENST00000559550 TIMM13Q9Y5L4 95 aaPredicted RBP5.07□□□□□ -1.6
CASC4-210ENST00000559550 ASXL2Q76L83 1435 aa5.06□□□□□ -1.6
CASC4-210ENST00000559550 TRBV23-1A0A0A0MS06 115 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms