RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PGM5Q15124 567 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 LY6KQ17RY6 165 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 CCDC62Q6P9F0 684 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 CCDC82Q8N4S0 544 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 CUL5Q93034 780 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 RBM28Q9NW13 759 aaKnown RBP14.53□□□□□ -0.08
LRRC28-214ENST00000559433 BRPF3Q9ULD4 1205 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 NAP1L2Q9ULW6 460 aaPredicted RBP14.53□□□□□ -0.08
LRRC28-214ENST00000559433 SCN10AQ9Y5Y9 1956 aa14.53□□□□□ -0.08
LRRC28-214ENST00000559433 KLF18A0A0U1RQI7 1052 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.09
LRRC28-214ENST00000559433 KPNA6O60684 536 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 GH1P01241 217 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 ITGB8P26012 769 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 CCND2P30279 289 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 PURAQ00577 322 aaKnown RBP14.52□□□□□ -0.09
LRRC28-214ENST00000559433 RTN1Q16799 776 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 BLOC1S2Q6QNY1 142 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 FAM126BQ8IXS8 530 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 IL31RAQ8NI17 732 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 SMARCC2Q8TAQ2 1214 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 LRCH3Q96II8 777 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 MRVI1Q9Y6F6 885 aa14.52□□□□□ -0.09
LRRC28-214ENST00000559433 DOCK5Q9H7D0 1870 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 GRIN2DO15399 1336 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 CNTNAP5Q8WYK1 1306 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 A6NJR5 290 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 TIMP1P01033 207 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 FPGSQ05932 587 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 ARHGAP1Q07960 439 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 Q6ZUG5 572 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 HEATR3Q7Z4Q2 680 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 VSIG10LQ86VR7 867 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 SLC43A3Q8NBI5 491 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 MTG1Q9BT17 334 aaPredicted RBP14.51□□□□□ -0.09
LRRC28-214ENST00000559433 TBX21Q9UL17 535 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 SZT2Q5T011 3432 aa14.51□□□□□ -0.09
LRRC28-214ENST00000559433 FRMPD4Q14CM0 1322 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 CASTP20810 708 aaKnown RBP14.5□□□□□ -0.09
LRRC28-214ENST00000559433 PSMA5P28066 241 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 CHMP4BP1P59074 171 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 APOBRQ0VD83 1088 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 SHHQ15465 462 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 USP17L6PQ6QN14 398 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 AFG1LQ8WV93 481 aa14.5□□□□□ -0.09
LRRC28-214ENST00000559433 GPKOWQ92917 476 aaPredicted RBP eCLIP14.5□□□□□ -0.09
LRRC28-214ENST00000559433 DDX41Q9UJV9 622 aaKnown RBP14.5□□□□□ -0.09
LRRC28-214ENST00000559433 PIK3CDO00329 1044 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
LRRC28-214ENST00000559433 RGS20O76081 388 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 CD4P01730 458 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 MMP3P08254 477 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 SUPT20HL2P0C7V6 817 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 RPS6KB1P23443 525 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 RCAN1P53805 252 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 MFSD5Q6N075 450 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 KCNV1Q6PIU1 500 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
LRRC28-214ENST00000559433 DEFB123Q8N688 67 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 BRF1Q92994 677 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
LRRC28-214ENST00000559433 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 TRPV6Q9H1D0 765 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 PSTPIP2Q9H939 334 aa14.49□□□□□ -0.09
LRRC28-214ENST00000559433 MEIS2O14770 477 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 B4GALT4O60513 344 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 CDC27P30260 824 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRRC28-214ENST00000559433 PPIGQ13427 754 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRRC28-214ENST00000559433 LAMC2Q13753 1193 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 UBE2SQ16763 222 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 NBPF20Q3BBV1 942 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 GNPTABQ3T906 1256 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 C9orf50Q5SZB4 431 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
LRRC28-214ENST00000559433 EMID1Q96A84 441 aaPredicted RBP14.48□□□□□ -0.09
LRRC28-214ENST00000559433 RNPC3Q96LT9 517 aaKnown RBP14.48□□□□□ -0.09
LRRC28-214ENST00000559433 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
LRRC28-214ENST00000559433 SORBS3O60504 671 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 STAM2O75886 525 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 GGPS1O95749 300 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 UBA1P22314 1058 aaKnown RBP14.47□□□□□ -0.09
LRRC28-214ENST00000559433 EPHB4P54760 987 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 NAPAP54920 295 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 MRPS9P82933 396 aaKnown RBP14.47□□□□□ -0.09
LRRC28-214ENST00000559433 FUT2Q10981 343 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 DGKDQ16760 1214 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 NFRKBQ6P4R8 1299 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 PPP1R13LQ8WUF5 828 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 USP26Q9BXU7 913 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 HIPK3Q9H422 1215 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 FAM217BQ9NTX9 383 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms