RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 TRMT44Q8IYL2 757 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 TBCKQ8TEA7 893 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 TRIB2Q92519 343 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 LENG9Q96B70 501 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 INPP4AQ96PE3 977 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 NRBP1Q9UHY1 535 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 RBM47A0AV96 593 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 H3BQV1 296 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 WNT7AO00755 349 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 STAM2O75886 525 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 EIF2AK2P19525 551 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 CYP2B6P20813 491 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 TRAPPC10P48553 1259 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 ARMCX2Q7L311 632 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
SNRPA1-207ENST00000559309 MEIS1O00470 390 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 ICAM3P32942 547 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 INF2Q27J81 1249 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 TAPT1Q6NXT6 567 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 PIK3AP1Q6ZUJ8 805 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 NIPA1Q7RTP0 329 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 CENPFP49454 3210 aa16.89■□□□□ 0.29
SNRPA1-207ENST00000559309 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 VPS37CA5D8V6 355 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 FAM86B1E9PN63 330 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 F13A1P00488 732 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 FAM86B2P0C5J1 330 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 ZNF865P0CJ78 1059 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 ITGB5P18084 799 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 CCND2P30279 289 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 ORC2Q13416 577 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 STXBP2Q15833 593 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 Q4G0T1 1027 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 ABHD16BQ9H3Z7 469 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 EHMT1Q9H9B1 1298 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 PTCH2Q9Y6C5 1203 aa16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-207ENST00000559309 B4DLN1 442 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 ADCY3O60266 1144 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 CYBAP13498 195 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 UBXN2AP68543 259 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 MXRA8Q9BRK3 442 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 VTA1Q9NP79 307 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
SNRPA1-207ENST00000559309 MAFGO15525 162 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 HMGCRP04035 888 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 GCFC2P16383 781 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 NUCB2P80303 420 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 FERMT3Q86UX7 667 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 C4orf32Q8N8J7 132 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 TRPV1Q8NER1 839 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 CYP2W1Q8TAV3 490 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 GPRASP2Q96D09 838 aa16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-207ENST00000559309 SPATA31C2B4DYI2 1134 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 ELNP15502 786 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 CYP2C19P33261 490 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 CACNB2Q08289 660 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 PDE4DQ08499 809 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 TRIM32Q13049 653 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 FBXO46Q6PJ61 603 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
SNRPA1-207ENST00000559309 TDP2O95551 362 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 TGFB3P10600 412 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 GRK4P32298 578 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 NKX3-2P78367 333 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 PRPF38BQ5VTL8 546 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 B3GNT9Q6UX72 402 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 ETNPPLQ8TBG4 499 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 RAET1EQ8TD07 263 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 MKI67P46013 3256 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 FRMPD3Q5JV73 1810 aa16.84■□□□□ 0.29
SNRPA1-207ENST00000559309 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 TBX3O15119 743 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 DHX15O43143 795 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 ADCY6O43306 1168 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 SLC37A4O43826 429 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 ARIH2O95376 493 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms