RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ADCY7P51828 1080 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 LRRC63Q05C16 580 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 EHHADHQ08426 723 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 TMEM266Q2M3C6 531 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 ZNF713Q8N859 430 aaPredicted RBP18.41■□□□□ 0.54
SPG11-215ENST00000559193 RIN2Q8WYP3 895 aaPredicted RBP18.41■□□□□ 0.54
SPG11-215ENST00000559193 DRC1Q96MC2 740 aa18.41■□□□□ 0.54
SPG11-215ENST00000559193 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
SPG11-215ENST00000559193 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
SPG11-215ENST00000559193 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 FOXR1Q6PIV2 292 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 RRAGAQ7L523 313 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 MMGT1Q8N4V1 131 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 SNX29Q8TEQ0 813 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 FEZ2Q9UHY8 353 aaPredicted RBP18.4■□□□□ 0.54
SPG11-215ENST00000559193 BTAF1O14981 1849 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
SPG11-215ENST00000559193 DDX12PQ92771 950 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 TMEM51Q9NW97 253 aa18.4■□□□□ 0.54
SPG11-215ENST00000559193 UFL1O94874 794 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 FGFR1OPO95684 399 aaKnown RBP18.39■□□□□ 0.54
SPG11-215ENST00000559193 IVLP07476 585 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 PLCG2P16885 1265 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 ERCC3P19447 782 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 LRRC41Q15345 812 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 AFAP1L1Q8TED9 768 aa18.39■□□□□ 0.54
SPG11-215ENST00000559193 AENQ8WTP8 325 aaKnown RBP18.39■□□□□ 0.54
SPG11-215ENST00000559193 PLIN4Q96Q06 1357 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 AGPSO00116 658 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 AKR1B10O60218 316 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 IL1R1P14778 569 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 PRLRP16471 622 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 GGCXP38435 758 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 ITIH3Q06033 890 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 PDIA5Q14554 519 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 PDXDC1Q6P996 788 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 LRRC47Q8N1G4 583 aaKnown RBP18.39■□□□□ 0.53
SPG11-215ENST00000559193 HDAC7Q8WUI4 952 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 SALL4Q9UJQ4 1053 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 GAKO14976 1311 aa18.39■□□□□ 0.53
SPG11-215ENST00000559193 ECM1Q16610 540 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 ASTE1Q2TB18 679 aaPredicted RBP18.38■□□□□ 0.53
SPG11-215ENST00000559193 LRRC31Q6UY01 552 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 SRLQ86TD4 932 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 CCDC155Q8N6L0 562 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 OSBPL9Q96SU4 736 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 HINFPQ9BQA5 517 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 KRT79Q5XKE5 535 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 SPATA4Q8NEY3 305 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 CRACR2AQ9BSW2 395 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 LRRC1Q9BTT6 524 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 RAB34Q9BZG1 259 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 FAM184BQ9ULE4 1060 aa18.38■□□□□ 0.53
SPG11-215ENST00000559193 PJA2O43164 708 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 CLEC10AQ8IUN9 316 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
SPG11-215ENST00000559193 ALS2CR12Q96Q35 445 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 SMARCAL1Q9NZC9 954 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 DMGDHQ9UI17 866 aaKnown RBP18.37■□□□□ 0.53
SPG11-215ENST00000559193 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 MYO1CO00159 1063 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 MAGEA1P43355 309 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 TNNI2P48788 182 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 UBE2SQ16763 222 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 HGSNATQ68CP4 663 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
SPG11-215ENST00000559193 TSPYL1Q9H0U9 437 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 RIC8AQ9NPQ8 531 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 EHD2Q9NZN4 543 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 RRP15Q9Y3B9 282 aaKnown RBP18.37■□□□□ 0.53
SPG11-215ENST00000559193 NCK2O43639 380 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 RFC4P35249 363 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 GFPT1Q06210 699 aaPredicted RBP18.37■□□□□ 0.53
SPG11-215ENST00000559193 PSMD2Q13200 908 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 CCDC70Q6NSX1 233 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 FOXR2Q6PJQ5 311 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 GOLGA6L1Q8N7Z2 621 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 PSMB7Q99436 277 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 TSG101Q99816 390 aa18.37■□□□□ 0.53
SPG11-215ENST00000559193 PPP1R11O60927 126 aaPredicted RBP18.36■□□□□ 0.53
SPG11-215ENST00000559193 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
SPG11-215ENST00000559193 CXCR5P32302 372 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 SLC1A4P43007 532 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
SPG11-215ENST00000559193 COASYQ13057 564 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
SPG11-215ENST00000559193 MTMR8Q96EF0 704 aa18.36■□□□□ 0.53
SPG11-215ENST00000559193 GPCPD1Q9NPB8 672 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms