RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 AMNQ9BXJ7 453 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 LSG1Q9H089 658 aaKnown RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 HIPK3Q9H422 1215 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 BCAS3Q9H6U6 928 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 VAT1LQ9HCJ6 419 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 GPHNQ9NQX3 736 aaPredicted RBP6.47□□□□□ -1.37
SMAD3-209ENST00000558894 PXMP2Q9NR77 195 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 POLR3EQ9NVU0 708 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 FRMPD4Q14CM0 1322 aa6.47□□□□□ -1.37
SMAD3-209ENST00000558894 HAS3O00219 553 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 ZEB2O60315 1214 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 NR3C2P08235 984 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 MYL3P08590 195 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 CYP2C9P11712 490 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PTPN11Q06124 597 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 TTLL4Q14679 1199 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PPP2R5BQ15173 497 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 NECTIN1Q15223 517 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 TCTN1Q2MV58 587 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 NFRKBQ6P4R8 1299 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PSRC1Q6PGN9 363 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 TRAF7Q6Q0C0 670 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 VSIG10LQ86VR7 867 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 SESTD1Q86VW0 696 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 NLRC5Q86WI3 1866 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 MCF2L2Q86YR7 1114 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 USP38Q8NB14 1042 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 NSUN6Q8TEA1 469 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 AFG1LQ8WV93 481 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 DHX38Q92620 1227 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 GPKOWQ92917 476 aaPredicted RBP eCLIP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 RMDN3Q96TC7 470 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PDCD2LQ9BRP1 358 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 UBAC1Q9BSL1 405 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 ZNF576Q9H609 170 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 LY9Q9HBG7 655 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 MAP3K20Q9NYL2 800 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 YBX2Q9Y2T7 364 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 MRPL11Q9Y3B7 192 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 TELO2Q9Y4R8 837 aa6.46□□□□□ -1.38
SMAD3-209ENST00000558894 RBM8AQ9Y5S9 174 aaKnown RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 U3KPZ7 1027 aaPredicted RBP6.46□□□□□ -1.38
SMAD3-209ENST00000558894 PITPNM1O00562 1244 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 IFIT3O14879 490 aaKnown RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 KPNA6O60684 536 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 EIF3JO75822 258 aaKnown RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 CFBP00751 764 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 GH1P01241 217 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 FGBP02675 491 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 IQCF3P0C7M6 154 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 MYOGP15173 224 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 EIF2AK2P19525 551 aaKnown RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 HOXA13P31271 388 aaPredicted RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 MRPS9P82933 396 aaKnown RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 PLCB2Q00722 1185 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 RBL2Q08999 1139 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 ADGRE1Q14246 886 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 PGM5Q15124 567 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 STXBP2Q15833 593 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 HSDL1Q3SXM5 330 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 GDF6Q6KF10 455 aaPredicted RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 SEPT14Q6ZU15 432 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 OTOP2Q7RTS6 562 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 NCOA7Q8NI08 942 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 WNT8BQ93098 351 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 TIFAQ96CG3 184 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 ZFP91Q96JP5 570 aaPredicted RBP6.45□□□□□ -1.38
SMAD3-209ENST00000558894 MAP3K14Q99558 947 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 C16orf70Q9BSU1 422 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 PCDHA1Q9Y5I3 950 aa6.45□□□□□ -1.38
SMAD3-209ENST00000558894 TTC28Q96AY4 2481 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 KAT6AQ92794 2004 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 PNMA6FA0A0J9YX94 578 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 B4DLN1 442 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SH2B2O14492 632 aaPredicted RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MEIS2O14770 477 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 ARHGEF15O94989 841 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 F2P00734 622 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SUPT20HL2P0C7V6 817 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 FOSL2P15408 326 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SMARCA1P28370 1054 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 HOXC8P31273 242 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MRPL12P52815 198 aaKnown RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 RABGGTBP53611 331 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SEMA3FQ13275 785 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MKRN4PQ13434 485 aaPredicted RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MBTPS1Q14703 1052 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 WTAPQ15007 396 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 TRIM71Q2Q1W2 868 aaKnown RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 ARHGEF16Q5VV41 709 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 HOMER1Q86YM7 354 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 CMTR1Q8N1G2 835 aaKnown RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SRBD1Q8N5C6 995 aaKnown RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 SAMD3Q8N6K7 520 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MAFAQ8NHW3 353 aaPredicted RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 RUFY2Q8WXA3 655 aa6.44□□□□□ -1.38
SMAD3-209ENST00000558894 MPHOSPH6Q99547 160 aaKnown RBP6.44□□□□□ -1.38
SMAD3-209ENST00000558894 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms