RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 WDR44Q5JSH3 913 aa11.9□□□□□ -0.5
TMC3-202ENST00000558726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.9□□□□□ -0.5
TMC3-202ENST00000558726 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
TMC3-202ENST00000558726 FERMT1Q9BQL6 677 aa11.9□□□□□ -0.5
TMC3-202ENST00000558726 DPH5Q9H2P9 285 aa11.9□□□□□ -0.5
TMC3-202ENST00000558726 CEP83Q9Y592 693 aa11.9□□□□□ -0.5
TMC3-202ENST00000558726 BIRC3Q13489 604 aa11.9□□□□□ -0.51
TMC3-202ENST00000558726 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.51
TMC3-202ENST00000558726 SMC6Q96SB8 1091 aa11.9□□□□□ -0.51
TMC3-202ENST00000558726 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.51
TMC3-202ENST00000558726 COL15A1P39059 1388 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 SRGAP2O75044 1071 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 GAP43P17677 238 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 BTDP43251 543 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 RASSF2P50749 326 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 MSANTD4Q8NCY6 345 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 GRK7Q8WTQ7 553 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 FUT8Q9BYC5 575 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 TYW1Q9NV66 732 aaKnown RBP11.89□□□□□ -0.51
TMC3-202ENST00000558726 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 TTC19Q6DKK2 380 aaPredicted RBP11.89□□□□□ -0.51
TMC3-202ENST00000558726 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
TMC3-202ENST00000558726 HINFPQ9BQA5 517 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 ARHGEF10LQ9HCE6 1279 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
TMC3-202ENST00000558726 PLS1Q14651 629 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 MFSD14BQ5SR56 506 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
TMC3-202ENST00000558726 SALL1Q9NSC2 1324 aa11.89□□□□□ -0.51
TMC3-202ENST00000558726 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMC3-202ENST00000558726 FTCDO95954 541 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 ABCB4P21439 1286 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 GJC1P36383 396 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 MECOMQ03112 1051 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 MAP3K14Q99558 947 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 GYPCP04921 128 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 SRGNP10124 158 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 SLC7A5Q01650 507 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 ARHGAP44Q17R89 818 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 MXD3Q9BW11 206 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 KLHL14Q9P2G3 628 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 NFU1Q9UMS0 254 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 STX2P32856 288 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 BBOF1Q8ND07 529 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 INTS9Q9NV88 658 aaKnown RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 FRMPD2Q68DX3 1309 aaPredicted RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 CHMP2AO43633 222 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 KRT5P13647 590 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 MAN1A1P33908 653 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 SYNCQ9H7C4 482 aa11.88□□□□□ -0.51
TMC3-202ENST00000558726 CCNL1Q9UK58 526 aaPredicted RBP11.88□□□□□ -0.51
TMC3-202ENST00000558726 GRM4Q14833 912 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 FAM133AQ8N9E0 248 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 SPATA4Q8NEY3 305 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.51
TMC3-202ENST00000558726 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 LRRC41Q15345 812 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 CCDC63Q8NA47 563 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 FNBP1Q96RU3 617 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 XDHP47989 1333 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 SUN1O94901 812 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 PRR16Q569H4 304 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 BEND6Q5SZJ8 279 aaPredicted RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 PIGSQ96S52 555 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 STAMBPO95630 424 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 PSMC2P35998 433 aaKnown RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 MXRA7P84157 204 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
TMC3-202ENST00000558726 PDCLQ13371 301 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 NEDD9Q14511 834 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 ARHGAP24Q8N264 748 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 P3H4Q92791 437 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 STMN2Q93045 179 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
TMC3-202ENST00000558726 CHP1Q99653 195 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 KCNG1Q9UIX4 513 aa11.87□□□□□ -0.51
TMC3-202ENST00000558726 USP17L8P0C7I0 530 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms