RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 PCDHA5Q9Y5H7 936 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 NPFFR2Q9Y5X5 522 aa4.31□□□□□ -1.72
HERC1-203ENST00000558532 ARHGAP35Q9NRY4 1499 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 UNC13AQ9UPW8 1703 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 A0A1W2PQJ5 194 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 FAM221BA6H8Z2 402 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 IQCA1LA6NCM1 817 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 CCDC85CA6NKD9 419 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 F8W031 263 aaPredicted RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 U2SURPO15042 1029 aaKnown RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 DIAPH1O60610 1272 aaKnown RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 FUCA1P04066 466 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 FGFR1P11362 822 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 IGFBP6P24592 240 aaPredicted RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 PRR5P85299 388 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 HSP90AA2PQ14568 343 aaPredicted RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 NTRK3Q16288 839 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 IQCEQ6IPM2 695 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 LDHDQ86WU2 507 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 LRRC56Q8IYG6 542 aaPredicted RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 TMEFF1Q8IYR6 380 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 MZB1Q8WU39 189 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 SREK1Q8WXA9 508 aaKnown RBP4.3□□□□□ -1.72
HERC1-203ENST00000558532 KCTD13Q8WZ19 329 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 TSPAN17Q96FV3 270 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 USP35Q9P2H5 1018 aa4.3□□□□□ -1.72
HERC1-203ENST00000558532 RNF123Q5XPI4 1314 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 PRODHO43272 600 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 NTRK1P04629 796 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 PABPC1P11940 636 aaKnown RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 LTBRP36941 435 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 BCL6P41182 706 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 NCKAP1LP55160 1127 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 RPL11P62913 178 aaKnown RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 MTERF2Q49AM1 385 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 NPM2Q86SE8 214 aaKnown RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 CABP7Q86V35 215 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 SIGLEC10Q96LC7 697 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 TOX2Q96NM4 488 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 SPATA9Q9BWV2 254 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 BCAS3Q9H6U6 928 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 BTG4Q9NY30 223 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 SNTG2Q9NY99 539 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 PPP1R1BQ9UD71 204 aaPredicted RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 SIT1Q9Y3P8 196 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 TIMM13Q9Y5L4 95 aaPredicted RBP4.29□□□□□ -1.72
HERC1-203ENST00000558532 X6R8D5 127 aa4.29□□□□□ -1.72
HERC1-203ENST00000558532 TRAV20A0A0B4J274 112 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 C22orf46C9J442 243 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 MSCO60682 206 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 PI3P19957 117 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 FZD5Q13467 585 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 SPOCD1Q6ZMY3 1216 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 LCNL1Q6ZST4 164 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 PANK1Q8TE04 598 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 USP33Q8TEY7 942 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 PEX11GQ96HA9 241 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 DEPDC7Q96QD5 511 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 DNAJC2Q99543 621 aaKnown RBP4.28□□□□□ -1.72
HERC1-203ENST00000558532 CDIP1Q9H305 208 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 PFDN2Q9UHV9 154 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 CNOT6Q9ULM6 557 aaKnown RBP4.28□□□□□ -1.72
HERC1-203ENST00000558532 KCTD3Q9Y597 815 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 PCDHA2Q9Y5H9 948 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 IRAK3Q9Y616 596 aa4.28□□□□□ -1.72
HERC1-203ENST00000558532 ZBED9Q6R2W3 1325 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 LRRC9Q6ZRR7 1453 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 BLACEA4D250 179 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 SGSM2O43147 1006 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 ANP32CO43423 234 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 NUAK1O60285 661 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 BUB1BO60566 1050 aaPredicted RBP4.27□□□□□ -1.73
HERC1-203ENST00000558532 ASGR2P07307 311 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 ATF2P15336 505 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 PMLP29590 882 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 MC3RP41968 323 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 SLC6A11P48066 632 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 GTF2A2P52657 109 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 RBM10P98175 930 aaKnown RBP4.27□□□□□ -1.73
HERC1-203ENST00000558532 SSRP1Q08945 709 aaKnown RBP4.27□□□□□ -1.73
HERC1-203ENST00000558532 MROH9Q5TGP6 573 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 FOXB2Q5VYV0 432 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 NSMFQ6X4W1 530 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 USP53Q70EK8 1073 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 CEP68Q76N32 757 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 LRP10Q7Z4F1 713 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 FAM129CQ86XR2 697 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 DCP2Q8IU60 420 aaKnown RBP4.27□□□□□ -1.73
HERC1-203ENST00000558532 PMFBP1Q8TBY8 1022 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 ALG3Q92685 438 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 PHF20Q9BVI0 1012 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 GPR27Q9NS67 375 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 DBR1Q9UK59 544 aaKnown RBP4.27□□□□□ -1.73
HERC1-203ENST00000558532 NUDT5Q9UKK9 219 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 HECW1Q76N89 1606 aa4.27□□□□□ -1.73
HERC1-203ENST00000558532 CNTLNQ9NXG0 1405 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms