RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 EN2P19622 333 aaPredicted RBP29.22■■■□□ 2.27
SMAD6-202ENST00000557916 PCNX4Q63HM2 1172 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 XRRA1Q6P2D8 792 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 BLIDQ8IZY5 108 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 FAM184AQ8NB25 1140 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 DAGLBQ8NCG7 672 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 RASGRP4Q8TDF6 673 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 SCFD2Q8WU76 684 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 LENG1Q96BZ8 264 aaPredicted RBP29.22■■■□□ 2.27
SMAD6-202ENST00000557916 ZFP91Q96JP5 570 aaPredicted RBP29.22■■■□□ 2.27
SMAD6-202ENST00000557916 OGDHLQ9ULD0 1010 aa29.22■■■□□ 2.27
SMAD6-202ENST00000557916 ADCY6O43306 1168 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 FOSBP53539 338 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 MRPS9P82933 396 aaKnown RBP29.21■■■□□ 2.27
SMAD6-202ENST00000557916 NPY5RQ15761 445 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 SNX21Q969T3 373 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 WDR11Q9BZH6 1224 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 BRCA2P51587 3418 aa29.21■■■□□ 2.27
SMAD6-202ENST00000557916 DUSP11O75319 330 aaKnown RBP29.2■■■□□ 2.27
SMAD6-202ENST00000557916 CAPN15O75808 1086 aa29.2■■■□□ 2.27
SMAD6-202ENST00000557916 STAM2O75886 525 aa29.2■■■□□ 2.27
SMAD6-202ENST00000557916 SMPD1P17405 629 aa29.2■■■□□ 2.27
SMAD6-202ENST00000557916 CAPN2P17655 700 aa29.2■■■□□ 2.27
SMAD6-202ENST00000557916 TRIM29Q14134 588 aa29.2■■■□□ 2.27
SMAD6-202ENST00000557916 RGS20O76081 388 aa29.2■■■□□ 2.26
SMAD6-202ENST00000557916 TMEM63BQ5T3F8 832 aa29.2■■■□□ 2.26
SMAD6-202ENST00000557916 XPNPEP3Q9NQH7 507 aa29.2■■■□□ 2.26
SMAD6-202ENST00000557916 RTEL1Q9NZ71 1219 aa29.2■■■□□ 2.26
SMAD6-202ENST00000557916 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.2■■■□□ 2.26
SMAD6-202ENST00000557916 K7ELQ4 463 aaPredicted RBP29.19■■■□□ 2.26
SMAD6-202ENST00000557916 SREBF1P36956 1147 aa29.19■■■□□ 2.26
SMAD6-202ENST00000557916 CUL4AQ13619 759 aa29.19■■■□□ 2.26
SMAD6-202ENST00000557916 TTLL4Q14679 1199 aa29.19■■■□□ 2.26
SMAD6-202ENST00000557916 DUSP28Q4G0W2 176 aa29.19■■■□□ 2.26
SMAD6-202ENST00000557916 TXNP10599 105 aaKnown RBP29.18■■■□□ 2.26
SMAD6-202ENST00000557916 KRT40Q6A162 431 aa29.18■■■□□ 2.26
SMAD6-202ENST00000557916 C8orf76Q96K31 380 aa29.18■■■□□ 2.26
SMAD6-202ENST00000557916 INPP4AQ96PE3 977 aaPredicted RBP29.18■■■□□ 2.26
SMAD6-202ENST00000557916 GNEQ9Y223 722 aaKnown RBP29.18■■■□□ 2.26
SMAD6-202ENST00000557916 MRVI1Q9Y6F6 885 aa29.18■■■□□ 2.26
SMAD6-202ENST00000557916 M0R2N6 131 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 ARHGAP4P98171 946 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 GNPTABQ3T906 1256 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 BRMS1Q9HCU9 246 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 SMC3Q9UQE7 1217 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 KIF3AQ9Y496 699 aa29.17■■■□□ 2.26
SMAD6-202ENST00000557916 ARIH2O95376 493 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 PGK1P00558 417 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 MMP1P03956 469 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 GJC2Q5T442 439 aaPredicted RBP29.16■■■□□ 2.26
SMAD6-202ENST00000557916 CCDC62Q6P9F0 684 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 HSCBQ8IWL3 235 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 ARRDC4Q8NCT1 418 aa29.16■■■□□ 2.26
SMAD6-202ENST00000557916 SYNRGQ9UMZ2 1314 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 MYCNP04198 464 aaPredicted RBP29.15■■■□□ 2.26
SMAD6-202ENST00000557916 PTGS1P23219 599 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 GJB2P29033 226 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 KRT2P35908 639 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 KCNV1Q6PIU1 500 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 TLK2Q86UE8 772 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 NLRX1Q86UT6 975 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 ANKLE1Q8NAG6 615 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 OXER1Q8TDS5 423 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 SPC25Q9HBM1 224 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 DDX41Q9UJV9 622 aaKnown RBP29.15■■■□□ 2.26
SMAD6-202ENST00000557916 Q9Y3F1 56 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 UBIAD1Q9Y5Z9 338 aa29.15■■■□□ 2.26
SMAD6-202ENST00000557916 NKRFO15226 690 aaKnown RBP eCLIP29.14■■■□□ 2.26
SMAD6-202ENST00000557916 DYNC1LI2O43237 492 aaPredicted RBP29.14■■■□□ 2.26
SMAD6-202ENST00000557916 GUCY1B3Q02153 619 aa29.14■■■□□ 2.26
SMAD6-202ENST00000557916 LY6KQ17RY6 165 aa29.14■■■□□ 2.26
SMAD6-202ENST00000557916 CRYGNQ8WXF5 182 aa29.14■■■□□ 2.26
SMAD6-202ENST00000557916 AP5M1Q9H0R1 490 aa29.14■■■□□ 2.26
SMAD6-202ENST00000557916 KIAA1217Q5T5P2 1943 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 ADAMTS4O75173 837 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 CYP3A4P08684 503 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 TGFB3P10600 412 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 ITGB5P18084 799 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 ZNF76P36508 570 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 GJA9P57773 515 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 LRRC41Q15345 812 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 KRT25Q7Z3Z0 450 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 RNF180Q86T96 592 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 COPS5Q92905 334 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 UPF3AQ9H1J1 476 aaKnown RBP29.13■■■□□ 2.25
SMAD6-202ENST00000557916 FRMPD3Q5JV73 1810 aa29.13■■■□□ 2.25
SMAD6-202ENST00000557916 CCDC194A0A1B0GVG4 234 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 SPATA31C2B4DYI2 1134 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 FIBPO43427 364 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 C6orf222P0C671 652 aaPredicted RBP29.12■■■□□ 2.25
SMAD6-202ENST00000557916 ICAM3P32942 547 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 FBXO18Q8NFZ0 1043 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 TBCKQ8TEA7 893 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 GPRASP2Q96D09 838 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 MXRA8Q9BRK3 442 aa29.12■■■□□ 2.25
SMAD6-202ENST00000557916 NR5A1Q13285 461 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 NONOQ15233 471 aaKnown RBP eCLIP29.11■■■□□ 2.256e-7■■■■□ 25.4
SMAD6-202ENST00000557916 SAFBQ15424 915 aaKnown RBP eCLIP29.11■■■□□ 2.25
SMAD6-202ENST00000557916 CEP55Q53EZ4 464 aa29.11■■■□□ 2.25
SMAD6-202ENST00000557916 DIS3L2Q8IYB7 885 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms