RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 PFASO15067 1338 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 MARCH6O60337 910 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 ERCC3P19447 782 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 ERVK-24P63145 666 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 PGM5Q15124 567 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 CEP55Q53EZ4 464 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 ARHGEF16Q5VV41 709 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 KRBA2Q6ZNG9 492 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 SHCBP1Q8NEM2 672 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 PTPN18Q99952 460 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 PYM1Q9BRP8 204 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 RAB34Q9BZG1 259 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
ARHGEF40-208ENST00000557498 A0A087X0B3 334 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 MSH4O15457 936 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 POLR2DO15514 142 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 FSTL1Q12841 308 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 GSE1Q14687 1217 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 Q3C1V9 767 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 XRRA1Q6P2D8 792 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 FAM20AQ96MK3 541 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 MORF4L1Q9UBU8 362 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 USP25Q9UHP3 1055 aa16.34■□□□□ 0.21
ARHGEF40-208ENST00000557498 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 FAM155AB1AL88 458 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 MEIS1O00470 390 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 ACTN4O43707 911 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 CCND2P30279 289 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 UBA7P41226 1012 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 PDIA5Q14554 519 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 LONRF3Q496Y0 759 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 ELOA2Q8IYF1 753 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 PDILTQ8N807 584 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 CNNM3Q8NE01 707 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 GPRC5AQ8NFJ5 357 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 GJA10Q969M2 543 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 CCDC102AQ96A19 550 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 DHX58Q96C10 678 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 MROH8Q9H579 483 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 SERTAD1Q9UHV2 236 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 PCDHA12Q9UN75 941 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 UBIAD1Q9Y5Z9 338 aa16.33■□□□□ 0.2
ARHGEF40-208ENST00000557498 POTEMA6NI47 508 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 BCRP11274 1271 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 ITGB5P18084 799 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 CDC25AP30304 524 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 CCNA1P78396 465 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 MRPS9P82933 396 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 E2F4Q16254 413 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 CABP7Q86V35 215 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 ANKRD13CQ8N6S4 541 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 ZFP91Q96JP5 570 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 DISC1Q9NRI5 854 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
ARHGEF40-208ENST00000557498 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 ADGRA2Q96PE1 1338 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 ARP10275 920 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 IQUBQ8NA54 791 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 MMP19Q99542 508 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
ARHGEF40-208ENST00000557498 SLC26A4O43511 780 aa16.3■□□□□ 0.2
ARHGEF40-208ENST00000557498 NR3C2P08235 984 aa16.3■□□□□ 0.2
ARHGEF40-208ENST00000557498 SLFN14P0C7P3 912 aa16.3■□□□□ 0.2
ARHGEF40-208ENST00000557498 YY1P25490 414 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms