RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GRXCR1A8MXD5 290 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 EIF3JO75822 258 aaKnown RBP16.44■□□□□ 0.22
SNX6-210ENST00000557341 NR3C2P08235 984 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 TROAPQ12815 778 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 RAB30Q15771 203 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 TMEM67Q5HYA8 995 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 OTOP2Q7RTS6 562 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
SNX6-210ENST00000557341 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 PIGSQ96S52 555 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 ZNF576Q9H609 170 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 SENP2Q9HC62 589 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 CXXC1Q9P0U4 656 aaPredicted RBP16.44■□□□□ 0.22
SNX6-210ENST00000557341 NOD1Q9Y239 953 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 MRVI1Q9Y6F6 885 aa16.44■□□□□ 0.22
SNX6-210ENST00000557341 KAT6AQ92794 2004 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 PBX2P40425 430 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 ANTXR2P58335 489 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 EMID1Q96A84 441 aaPredicted RBP16.43■□□□□ 0.22
SNX6-210ENST00000557341 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 REV3LO60673 3130 aa16.43■□□□□ 0.22
SNX6-210ENST00000557341 CYTH3O43739 400 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
SNX6-210ENST00000557341 HOXA13P31271 388 aaPredicted RBP16.42■□□□□ 0.22
SNX6-210ENST00000557341 RFC2P35250 354 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 GRIN2CQ14957 1233 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 PGM5Q15124 567 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 DGKDQ16760 1214 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
SNX6-210ENST00000557341 DDX41Q9UJV9 622 aaKnown RBP16.42■□□□□ 0.22
SNX6-210ENST00000557341 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
SNX6-210ENST00000557341 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 PNMA6FA0A0J9YX94 578 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 GCOM1H8Y6P7 765 aaPredicted RBP16.41■□□□□ 0.22
SNX6-210ENST00000557341 DDAH1O94760 285 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 MYCLP12524 364 aaPredicted RBP16.41■□□□□ 0.22
SNX6-210ENST00000557341 BFSP2Q13515 415 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 CASC1Q6TDU7 716 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 SESTD1Q86VW0 696 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
SNX6-210ENST00000557341 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 CCDC155Q8N6L0 562 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 PPTC7Q8NI37 304 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
SNX6-210ENST00000557341 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 MTA3Q9BTC8 594 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 KATNAL1Q9BW62 490 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 SLC4A7Q9Y6M7 1214 aa16.41■□□□□ 0.22
SNX6-210ENST00000557341 ACTN1P12814 892 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 CCND2P30279 289 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 KIF5BP33176 963 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 PTGISQ16647 500 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 DEFB128Q7Z7B8 93 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 RETREG2Q8NC44 543 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 IL31RAQ8NI17 732 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 VWCEQ96DN2 955 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 GAS2L1Q99501 681 aaPredicted RBP16.4■□□□□ 0.22
SNX6-210ENST00000557341 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
SNX6-210ENST00000557341 PRC1O43663 620 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 RGS20O76081 388 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 F2P00734 622 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 IQCF3P0C7M6 154 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 ZNF286BP0CG31 522 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 MCM5P33992 734 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
SNX6-210ENST00000557341 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 CAGE1Q8TC20 777 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 KAT2BQ92831 832 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
SNX6-210ENST00000557341 SLC28A3Q9HAS3 691 aa16.39■□□□□ 0.21
SNX6-210ENST00000557341 SIP14410 1827 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 ATP2A2P16615 1042 aaKnown RBP16.38■□□□□ 0.21
SNX6-210ENST00000557341 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
SNX6-210ENST00000557341 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
SNX6-210ENST00000557341 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 NKX2-4Q9H2Z4 354 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
SNX6-210ENST00000557341 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
SNX6-210ENST00000557341 SPTBN5Q9NRC6 3674 aaKnown RBP16.38■□□□□ 0.21
SNX6-210ENST00000557341 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms