RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 PDE4DQ08499 809 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 DSG2Q14126 1118 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 SCFD2Q8WU76 684 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 MTG1Q9BT17 334 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 GPHNQ9NQX3 736 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-231ENST00000557336 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 PDE4AP27815 886 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 GPNMBQ14956 572 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 STAG2Q8N3U4 1231 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 KAT2BQ92831 832 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
HNRNPC-231ENST00000557336 NKRFO15226 690 aaKnown RBP eCLIP13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 ST18O60284 1047 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 PPP1R11O60927 126 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 ARHGAP1Q07960 439 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 SEC23AQ15436 765 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 RAB30Q15771 203 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 AFG1LQ8WV93 481 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 MAF1Q9H063 256 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
HNRNPC-231ENST00000557336 RGS20O76081 388 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 IQCF3P0C7M6 154 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 SUPT20HL2P0C7V6 817 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 NT5C2P49902 561 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 GHRHRQ02643 423 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 ASPRV1Q53RT3 343 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 DEFB128Q7Z7B8 93 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 TET1Q8NFU7 2136 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 ABCB11O95342 1321 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
HNRNPC-231ENST00000557336 GBF1Q92538 1859 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 KPNA6O60684 536 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 SEPT14Q6ZU15 432 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 DHX38Q92620 1227 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
HNRNPC-231ENST00000557336 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 EPOPA6NHQ4 379 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 PFKMP08237 780 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 MMP3P08254 477 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 HSD17B4P51659 736 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 HIC1Q14526 733 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 CCDC85BQ15834 202 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 GDF6Q6KF10 455 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 PRRC2BQ5JSZ5 2229 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-231ENST00000557336 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 KLRF2D3W0D1 207 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 RFXAPO00287 272 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 HIP1O00291 1037 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 GH1P01241 217 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 NR3C2P08235 984 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms