RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SCN10AQ9Y5Y9 1956 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 PPP1R11O60927 126 aaPredicted RBP18.46■□□□□ 0.55
TUBB3-213ENST00000557262 IQCF3P0C7M6 154 aa18.46■□□□□ 0.55
TUBB3-213ENST00000557262 GRM4Q14833 912 aa18.46■□□□□ 0.55
TUBB3-213ENST00000557262 DGKDQ16760 1214 aa18.46■□□□□ 0.55
TUBB3-213ENST00000557262 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
TUBB3-213ENST00000557262 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
TUBB3-213ENST00000557262 NCOA7Q8NI08 942 aa18.46■□□□□ 0.55
TUBB3-213ENST00000557262 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.55
TUBB3-213ENST00000557262 E7EWF7 191 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 SGSM2O43147 1006 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 ACTN1P12814 892 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 ATP2A2P16615 1042 aaKnown RBP18.45■□□□□ 0.54
TUBB3-213ENST00000557262 RABGGTBP53611 331 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 SART3Q15020 963 aaKnown RBP18.45■□□□□ 0.54
TUBB3-213ENST00000557262 PTGISQ16647 500 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 SESTD1Q86VW0 696 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 KAT2BQ92831 832 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 EMID1Q96A84 441 aaPredicted RBP18.45■□□□□ 0.54
TUBB3-213ENST00000557262 PIGSQ96S52 555 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 PCDHA11Q9Y5I1 949 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 MYO9BQ13459 2157 aa18.45■□□□□ 0.54
TUBB3-213ENST00000557262 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 MYCLP12524 364 aaPredicted RBP18.44■□□□□ 0.54
TUBB3-213ENST00000557262 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
TUBB3-213ENST00000557262 WTAPQ15007 396 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 SLC35G1Q2M3R5 365 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 KCNV1Q6PIU1 500 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 DHX37Q8IY37 1157 aaKnown RBP18.44■□□□□ 0.54
TUBB3-213ENST00000557262 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 SENP2Q9HC62 589 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 MYH6P13533 1939 aa18.44■□□□□ 0.54
TUBB3-213ENST00000557262 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-213ENST00000557262 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 HOXA13P31271 388 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-213ENST00000557262 TROAPQ12815 778 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 GDF6Q6KF10 455 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-213ENST00000557262 CCDC155Q8N6L0 562 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 USP38Q8NB14 1042 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 CAGE1Q8TC20 777 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 FTOQ9C0B1 505 aaKnown RBP eCLIP18.43■□□□□ 0.54
TUBB3-213ENST00000557262 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
TUBB3-213ENST00000557262 CYTH3O43739 400 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 PPFIA4O75335 1185 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 RGS20O76081 388 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 TGFB3P10600 412 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 MYOGP15173 224 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 ADGRE1Q14246 886 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 PGM5Q15124 567 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 TMEM67Q5HYA8 995 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 CATIPQ7Z7H3 387 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 PPTC7Q8NI37 304 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 PHOSPHO2Q8TCD6 241 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 IGDCC4Q8TDY8 1250 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
TUBB3-213ENST00000557262 CTAGE1Q96RT6 745 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 KATNAL1Q9BW62 490 aa18.42■□□□□ 0.54
TUBB3-213ENST00000557262 KIAA1217Q5T5P2 1943 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 IGFBP4P22692 258 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 PSEN2P49810 448 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 MYSM1Q5VVJ2 828 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 PPP2R2DQ66LE6 453 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 ALG1Q9BT22 464 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 CHD7Q9P2D1 2997 aa18.41■□□□□ 0.54
TUBB3-213ENST00000557262 HAS3O00219 553 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 SELPP16109 830 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 CCND2P30279 289 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 ANTXR2P58335 489 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 MFSD10Q14728 455 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 CELF3Q5SZQ8 465 aaKnown RBP18.4■□□□□ 0.54
TUBB3-213ENST00000557262 FCHSD1Q86WN1 690 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 SLC9A7Q96T83 725 aa18.4■□□□□ 0.54
TUBB3-213ENST00000557262 GBF1Q92538 1859 aa18.39■□□□□ 0.54
TUBB3-213ENST00000557262 KIF28PB7ZC32 967 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
TUBB3-213ENST00000557262 HOXD8P13378 290 aaPredicted RBP18.39■□□□□ 0.53
TUBB3-213ENST00000557262 SP2Q02086 613 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
TUBB3-213ENST00000557262 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 SPATA33Q96N06 139 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 MAP3K14Q99558 947 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
TUBB3-213ENST00000557262 SCN5AQ14524 2016 aa18.39■□□□□ 0.53
TUBB3-213ENST00000557262 BAIAP3O94812 1187 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 GGPS1O95749 300 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 F2P00734 622 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 ZNF286BP0CG31 522 aa18.38■□□□□ 0.53
TUBB3-213ENST00000557262 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms