RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 BMP1P13497 986 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 GHRHRQ02643 423 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 TAP1Q03518 808 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 SKAP1Q86WV1 359 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 NSUN6Q8TEA1 469 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 IWS1Q96ST2 819 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 MTCH2Q9Y6C9 303 aa12.52□□□□□ -0.41
HNRNPC-230ENST00000557201 TRANK1O15050 2925 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 TET1Q8NFU7 2136 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 B4E1Z4 1266 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 OPLAHO14841 1288 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 GH1P01241 217 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 BFSP2Q13515 415 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 PTGISQ16647 500 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 QRICH1Q2TAL8 776 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 HERC6Q8IVU3 1022 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 DSCC1Q9BVC3 393 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-230ENST00000557201 HAS3O00219 553 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 CXCL10P02778 98 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 HOXD8P13378 290 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 STXBP2Q15833 593 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 POTEHQ6S545 545 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 SEPT14Q6ZU15 432 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 MTMR8Q96EF0 704 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
HNRNPC-230ENST00000557201 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 HIP1O00291 1037 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 LPXNO60711 386 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 EIF3JO75822 258 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 RGS20O76081 388 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 HSD17B4P51659 736 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 TFF2Q03403 129 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 KRT40Q6A162 431 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 SPRED2Q7Z698 418 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 IL25Q9H293 177 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 PXMP2Q9NR77 195 aa12.49□□□□□ -0.41
HNRNPC-230ENST00000557201 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 NBNO60934 754 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 F2P00734 622 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 NR3C2P08235 984 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 PARP1P09874 1014 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 SELPP16109 830 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 EIF2AK2P19525 551 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 COL9A1P20849 921 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 WDR5P61964 334 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 SEC23AQ15436 765 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 DGKDQ16760 1214 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 TRIM71Q2Q1W2 868 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 NECAB3Q96P71 396 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 HDAC6Q9UBN7 1215 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 PRRC2BQ5JSZ5 2229 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 TRIP12Q14669 1992 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-230ENST00000557201 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 PARNO95453 639 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 CKBP12277 381 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 PSEN2P49810 448 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 KCNQ1P51787 676 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 GRB10Q13322 594 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 LAMC2Q13753 1193 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 HIC1Q14526 733 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 ARHGEF16Q5VV41 709 aa12.47□□□□□ -0.41
HNRNPC-230ENST00000557201 STOX1Q6ZVD7 989 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms