RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 GNEQ9Y223 722 aaKnown RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 PTPRFP10586 1907 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 PHIPQ8WWQ0 1821 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 A0A0G2JMZ2 1700 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 ASB14A6NK59 587 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 AMHP03971 560 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 RB1P06400 928 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 GUCY1A2P33402 732 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 USP5P45974 858 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 RPIAP49247 311 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 NDUFV1P49821 464 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 PTPN11Q06124 597 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-245ENST00000556958 DLX2Q07687 328 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-245ENST00000556958 HYAL1Q12794 435 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 AMHR2Q16671 573 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 FAM117BQ6P1L5 589 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 NFRKBQ6P4R8 1299 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 TMEM192Q8IY95 271 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 UBALD2Q8IYN6 164 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 SPICE1Q8N0Z3 855 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 CAGE1Q8TC20 777 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 XAGE2Q96GT9 111 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 MTG1Q9BT17 334 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-245ENST00000556958 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 VCPKMTQ9H867 229 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 ZNF214Q9UL59 606 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-245ENST00000556958 TMX2Q9Y320 296 aa6.98□□□□□ -1.29
ATXN3-245ENST00000556958 FASNP49327 2511 aaKnown RBP6.98□□□□□ -1.29
ATXN3-245ENST00000556958 COL4A6Q14031 1691 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 USP17L21D6R901 530 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 KPNA6O60684 536 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 SELPP16109 830 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 CPT1AP50416 773 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 CLCN5P51795 746 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-245ENST00000556958 DMWDQ09019 674 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 ADAM15Q13444 863 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-245ENST00000556958 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
ATXN3-245ENST00000556958 TMEM179Q6ZVK1 233 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 METTL3Q86U44 580 aaKnown RBP6.97□□□□□ -1.29
ATXN3-245ENST00000556958 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 PARP9Q8IXQ6 854 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 CCDC144CPQ8IYA2 1237 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 TMEM105Q8N8V8 129 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 RUBCNQ92622 972 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 MFSD1Q9H3U5 465 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 SENP2Q9HC62 589 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 HDAC5Q9UQL6 1122 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 ASTN1O14525 1302 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
ATXN3-245ENST00000556958 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.29
ATXN3-245ENST00000556958 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 ZBED4O75132 1171 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 PDGFBP01127 241 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 CXCL10P02778 98 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 UQCRFS1P1P0C7P4 283 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 SMPD1P17405 629 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 ATF7P17544 494 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 SHMT1P34896 483 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 RRP1P56182 461 aaKnown RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 COASYQ13057 564 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 TMEM132AQ24JP5 1023 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 KMT5BQ4FZB7 885 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 GPR161Q8N6U8 529 aaKnown RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 SMRP1Q8NCR6 262 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 CHST13Q8NET6 341 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 NLRP7Q8WX94 980 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 MSLNLQ96KJ4 702 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 NEUROD6Q96NK8 337 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 YME1L1Q96TA2 773 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-245ENST00000556958 KATNBL1Q9H079 304 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 DOCK2Q92608 1830 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 ZNF236Q9UL36 1845 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 TRIOO75962 3097 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 IL16Q14005 1332 aa6.96□□□□□ -1.3
ATXN3-245ENST00000556958 ATP2A1O14983 1001 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 TBX10O75333 385 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 MYL3P08590 195 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 CLCN1P35523 988 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 PURAQ00577 322 aaKnown RBP6.95□□□□□ -1.3
ATXN3-245ENST00000556958 MTMR3Q13615 1198 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 LRRC8DQ7L1W4 858 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 MYOCDQ8IZQ8 938 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 CYP2W1Q8TAV3 490 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 GOPCQ9HD26 462 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
ATXN3-245ENST00000556958 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
ATXN3-245ENST00000556958 RWDD3Q9Y3V2 267 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms