RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PRR5LQ6MZQ0 368 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 TTLL6Q8N841 843 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 ZNF396Q96N95 335 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 UPF3BQ9BZI7 483 aaKnown RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 NYXQ9GZU5 481 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 HELLSQ9NRZ9 838 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
CPSF2-205ENST00000556622 CICQ96RK0 1608 aaPredicted RBP7.12□□□□□ -1.27
CPSF2-205ENST00000556622 CARMIL3Q8ND23 1372 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 C4AP0C0L4 1744 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 H3BQV1 296 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 DDX3YO15523 660 aaKnown RBP7.11□□□□□ -1.27
CPSF2-205ENST00000556622 HSP90B1P14625 803 aaKnown RBP7.11□□□□□ -1.27
CPSF2-205ENST00000556622 GJB2P29033 226 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 CDC25BP30305 580 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 GCKRQ14397 625 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 MAP3K11Q16584 847 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 HSP90AB3PQ58FF7 597 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 CREB3L3Q68CJ9 461 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 ZSCAN25Q6NSZ9 544 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPSF2-205ENST00000556622 UBE2Q2Q8WVN8 375 aa7.11□□□□□ -1.27
CPSF2-205ENST00000556622 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
CPSF2-205ENST00000556622 ADCY9O60503 1353 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 RPS6KB1P23443 525 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 IL15P40933 162 aaPredicted RBP7.1□□□□□ -1.27
CPSF2-205ENST00000556622 TCIRG1Q13488 830 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 MCMDC2Q4G0Z9 681 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 PARP10Q53GL7 1025 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 SUSD4Q5VX71 490 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 ACAD11Q709F0 780 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 ZNF34Q8IZ26 560 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 PLBD2Q8NHP8 589 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 PIBF1Q8WXW3 757 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 MASTLQ96GX5 879 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 FRMD6Q96NE9 622 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 NEK1Q96PY6 1258 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 NOL10Q9BSC4 688 aaKnown RBP7.1□□□□□ -1.27
CPSF2-205ENST00000556622 UTP14AQ9BVJ6 771 aaKnown RBP7.1□□□□□ -1.27
CPSF2-205ENST00000556622 BCO2Q9BYV7 579 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 NUP62CLQ9H1M0 184 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 PALD1Q9ULE6 856 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 RBM8AQ9Y5S9 174 aaKnown RBP7.1□□□□□ -1.27
CPSF2-205ENST00000556622 C10orf71Q711Q0 1435 aa7.1□□□□□ -1.27
CPSF2-205ENST00000556622 ABCC12Q96J65 1359 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 RPAP1Q9BWH6 1393 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 VPS37CA5D8V6 355 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 GOLGA6L19H0YKK7 550 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 KIF2AO00139 706 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 ALDH1B1P30837 517 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 PKP1Q13835 747 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 NAA16Q6N069 864 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 CPLX2Q6PUV4 134 aaKnown RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 PI16Q6UXB8 463 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 LRP10Q7Z4F1 713 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 FBXL16Q8N461 479 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 PDCL2Q8N4E4 241 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 SLC7A3Q8WY07 619 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 SPATA32Q96LK8 384 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 MYRFLQ96LU7 910 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 DSCC1Q9BVC3 393 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 TMPRSS13Q9BYE2 586 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 TNMDQ9H2S6 317 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 SUGCTQ9HAC7 445 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 TRMT112Q9UI30 125 aaKnown RBP7.09□□□□□ -1.27
CPSF2-205ENST00000556622 CHD4Q14839 1912 aa7.09□□□□□ -1.27
CPSF2-205ENST00000556622 AFDNP55196 1824 aaKnown RBP7.08□□□□□ -1.28
CPSF2-205ENST00000556622 LOC100289279A0A1B0GTE1 492 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 SLC27A2O14975 620 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CCP110O43303 1012 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 MYO1BO43795 1136 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CDKL5O76039 1030 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CIAO1O76071 339 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 SRGNP10124 158 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 NPR1P16066 1061 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 ERCC3P19447 782 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 RABL6Q3YEC7 729 aaPredicted RBP7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC158Q5M9N0 1113 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 STYK1Q6J9G0 422 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 TMED8Q6PL24 325 aaPredicted RBP7.08□□□□□ -1.28
CPSF2-205ENST00000556622 NFXL1Q6ZNB6 911 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC73Q6ZRK6 1079 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CBLL1Q75N03 491 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 NLRP10Q86W26 655 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC83Q8IWF9 413 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CCDC191Q8NCU4 936 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 UBASH3BQ8TF42 649 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 HAUS7Q99871 368 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 CEP41Q9BYV8 373 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPSF2-205ENST00000556622 RNF208Q9H0X6 261 aa7.08□□□□□ -1.28
CPSF2-205ENST00000556622 BICC1Q9H694 974 aaKnown RBP7.08□□□□□ -1.28
CPSF2-205ENST00000556622 MTMR6Q9Y217 621 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms