RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RETREG2Q8NC44 543 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 NOD1Q9Y239 953 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 MRVI1Q9Y6F6 885 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 SLC4A7Q9Y6M7 1214 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 A0A0C4DFX4 3053 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 SCN10AQ9Y5Y9 1956 aa26.23■■□□□ 1.79
ACTN1-220ENST00000556433 ZBBXA8MT70 800 aa26.22■■□□□ 1.79
ACTN1-220ENST00000556433 HOXA13P31271 388 aaPredicted RBP26.22■■□□□ 1.79
ACTN1-220ENST00000556433 CATIPQ7Z7H3 387 aa26.22■■□□□ 1.79
ACTN1-220ENST00000556433 PDCD2LQ9BRP1 358 aa26.22■■□□□ 1.79
ACTN1-220ENST00000556433 RBM8AQ9Y5S9 174 aaKnown RBP26.22■■□□□ 1.79
ACTN1-220ENST00000556433 CYTH3O43739 400 aa26.21■■□□□ 1.79
ACTN1-220ENST00000556433 PFKMP08237 780 aa26.21■■□□□ 1.79
ACTN1-220ENST00000556433 IGDCC4Q8TDY8 1250 aa26.21■■□□□ 1.79
ACTN1-220ENST00000556433 KAT2BQ92831 832 aa26.21■■□□□ 1.79
ACTN1-220ENST00000556433 PNMA6FA0A0J9YX94 578 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 GCOM1H8Y6P7 765 aaPredicted RBP26.2■■□□□ 1.78
ACTN1-220ENST00000556433 POLR2MP0CAP2 368 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 ANTXR2P58335 489 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 BFSP2Q13515 415 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 LAMC2Q13753 1193 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 PTGISQ16647 500 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 DGKDQ16760 1214 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 DHX37Q8IY37 1157 aaKnown RBP26.2■■□□□ 1.78
ACTN1-220ENST00000556433 MB21D2Q8IYB1 491 aaPredicted RBP26.2■■□□□ 1.78
ACTN1-220ENST00000556433 NKX2-4Q9H2Z4 354 aa26.2■■□□□ 1.78
ACTN1-220ENST00000556433 PITPNM1O00562 1244 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 IQCF3P0C7M6 154 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 RFC2P35250 354 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 VSIG10LQ86VR7 867 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 FCHSD1Q86WN1 690 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 EMID1Q96A84 441 aaPredicted RBP26.19■■□□□ 1.78
ACTN1-220ENST00000556433 COL25A1Q9BXS0 654 aaPredicted RBP26.19■■□□□ 1.78
ACTN1-220ENST00000556433 PRDM12Q9H4Q4 367 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 SLC28A3Q9HAS3 691 aa26.19■■□□□ 1.78
ACTN1-220ENST00000556433 YBX2Q9Y2T7 364 aaKnown RBP26.19■■□□□ 1.78
ACTN1-220ENST00000556433 BAZ2BQ9UIF8 2168 aaKnown RBP26.19■■□□□ 1.78
ACTN1-220ENST00000556433 RGS20O76081 388 aa26.18■■□□□ 1.78
ACTN1-220ENST00000556433 RABGGTBP53611 331 aa26.18■■□□□ 1.78
ACTN1-220ENST00000556433 PGM5Q15124 567 aa26.18■■□□□ 1.78
ACTN1-220ENST00000556433 SESTD1Q86VW0 696 aa26.18■■□□□ 1.78
ACTN1-220ENST00000556433 PIBF1Q8WXW3 757 aa26.18■■□□□ 1.78
ACTN1-220ENST00000556433 GAS2L1Q99501 681 aaPredicted RBP26.18■■□□□ 1.78
ACTN1-220ENST00000556433 MYO9BQ13459 2157 aa26.17■■□□□ 1.78
ACTN1-220ENST00000556433 ACTN1P12814 892 aa26.17■■□□□ 1.78
ACTN1-220ENST00000556433 ATP2A2P16615 1042 aaKnown RBP26.17■■□□□ 1.78
ACTN1-220ENST00000556433 GDF6Q6KF10 455 aaPredicted RBP26.17■■□□□ 1.78
ACTN1-220ENST00000556433 KCNV1Q6PIU1 500 aa26.17■■□□□ 1.78
ACTN1-220ENST00000556433 IL31RAQ8NI17 732 aa26.17■■□□□ 1.78
ACTN1-220ENST00000556433 PPTC7Q8NI37 304 aa26.17■■□□□ 1.78
ACTN1-220ENST00000556433 ZFP91Q96JP5 570 aaPredicted RBP26.17■■□□□ 1.78
ACTN1-220ENST00000556433 FTOQ9C0B1 505 aaKnown RBP eCLIP26.17■■□□□ 1.78
ACTN1-220ENST00000556433 CUL9Q8IWT3 2517 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 CCND2P30279 289 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 PSEN2P49810 448 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 C7orf31Q8N865 590 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 ALG1Q9BT22 464 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 KIAA1217Q5T5P2 1943 aa26.16■■□□□ 1.78
ACTN1-220ENST00000556433 SORBS3O60504 671 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 CELF3Q5SZQ8 465 aaKnown RBP26.15■■□□□ 1.78
ACTN1-220ENST00000556433 MYSM1Q5VVJ2 828 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 CASC1Q6TDU7 716 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 CCDC155Q8N6L0 562 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 CTCFLQ8NI51 663 aaPredicted RBP26.15■■□□□ 1.78
ACTN1-220ENST00000556433 CTAGE1Q96RT6 745 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 KATNAL1Q9BW62 490 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 LSG1Q9H089 658 aaKnown RBP26.15■■□□□ 1.78
ACTN1-220ENST00000556433 LY9Q9HBG7 655 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 HDAC6Q9UBN7 1215 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 PCDHA11Q9Y5I1 949 aa26.15■■□□□ 1.78
ACTN1-220ENST00000556433 PRC1O43663 620 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 PPFIA4O75335 1185 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 MYOGP15173 224 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 MFSD10Q14728 455 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 ZNF654Q8IZM8 581 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 CAGE1Q8TC20 777 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 SPATA33Q96N06 139 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 MAP3K14Q99558 947 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 MYL10Q9BUA6 226 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 GTF2IRD1Q9UHL9 959 aa26.14■■□□□ 1.78
ACTN1-220ENST00000556433 CDH23Q9H251 3354 aa26.14■■□□□ 1.77
ACTN1-220ENST00000556433 GGPS1O95749 300 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 ZNF286BP0CG31 522 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 TGFB3P10600 412 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 KIF5BP33176 963 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 KIAA0753Q2KHM9 967 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 USP38Q8NB14 1042 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 AFAP1L1Q8TED9 768 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 PPM1EQ8WY54 764 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 ESYT1Q9BSJ8 1104 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 MTA3Q9BTC8 594 aa26.13■■□□□ 1.77
ACTN1-220ENST00000556433 HAS3O00219 553 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 DDAH1O94760 285 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 F2P00734 622 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 MCM5P33992 734 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 SP2Q02086 613 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 HSDL1Q3SXM5 330 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 NFXL1Q6ZNB6 911 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 TMTC2Q8N394 836 aa26.12■■□□□ 1.77
ACTN1-220ENST00000556433 GPKOWQ92917 476 aaPredicted RBP eCLIP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms