RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SEPT14Q6ZU15 432 aa14.59□□□□□ -0.07
SNX6-207ENST00000556303 RPUSD2Q8IZ73 545 aaKnown RBP14.59□□□□□ -0.07
SNX6-207ENST00000556303 RRP36Q96EU6 259 aaKnown RBP14.59□□□□□ -0.07
SNX6-207ENST00000556303 PSMC6P62333 389 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
SNX6-207ENST00000556303 KRT32Q14532 448 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 DGKDQ16760 1214 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 TMEM240Q5SV17 173 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 RASIP1Q5U651 963 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 NFXL1Q6ZNB6 911 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 SGMS1Q86VZ5 419 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 COPS5Q92905 334 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 NOC4LQ9BVI4 516 aaKnown RBP14.58□□□□□ -0.08
SNX6-207ENST00000556303 MTIF3Q9H2K0 278 aaKnown RBP14.58□□□□□ -0.08
SNX6-207ENST00000556303 IL23AQ9NPF7 189 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 SEC63Q9UGP8 760 aaKnown RBP14.58□□□□□ -0.08
SNX6-207ENST00000556303 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.08
SNX6-207ENST00000556303 PIK3CDO00329 1044 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 CDC45O75419 566 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 PFKMP08237 780 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 CSF2RAP15509 400 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 CCND2P30279 289 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 ARHGAP1Q07960 439 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 PGM5Q15124 567 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 NBPF20Q3BBV1 942 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 XRRA1Q6P2D8 792 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 Q7L0L9 218 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 C16orf59Q7L2K0 433 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 TEX2Q8IWB9 1127 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.081e-14■□□□□ 11
SNX6-207ENST00000556303 PPP1R12CQ9BZL4 782 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 TRPV6Q9H1D0 765 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 SLC12A7Q9Y666 1083 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 MRVI1Q9Y6F6 885 aa14.57□□□□□ -0.08
SNX6-207ENST00000556303 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 MMP3P08254 477 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
SNX6-207ENST00000556303 HOXA13P31271 388 aaPredicted RBP14.56□□□□□ -0.08
SNX6-207ENST00000556303 CYP2C18P33260 490 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
SNX6-207ENST00000556303 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 AFG1LQ8WV93 481 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 HERVK_113Q902F9 699 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 CUL5Q93034 780 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 CCDC136Q96JN2 1154 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 KATNAL1Q9BW62 490 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 SEMA6BQ9H3T3 888 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 FRMPD4Q14CM0 1322 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SNX6-207ENST00000556303 PPFIA4O75335 1185 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 RGS20O76081 388 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 FGBP02675 491 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 MYCLP12524 364 aaPredicted RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 RFC2P35250 354 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 BFSP2Q13515 415 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 GNPTABQ3T906 1256 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 CELF3Q5SZQ8 465 aaKnown RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 DHX32Q7L7V1 743 aaKnown RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 RBM28Q9NW13 759 aaKnown RBP14.55□□□□□ -0.08
SNX6-207ENST00000556303 PRUNE2Q8WUY3 3088 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 CHD9Q3L8U1 2897 aa14.55□□□□□ -0.08
SNX6-207ENST00000556303 PARNO95453 639 aaKnown RBP14.54□□□□□ -0.08
SNX6-207ENST00000556303 ICAM3P32942 547 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 RCAN1P53805 252 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
SNX6-207ENST00000556303 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 MYSM1Q5VVJ2 828 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 FCHSD1Q86WN1 690 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 CCDC155Q8N6L0 562 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
SNX6-207ENST00000556303 CUL9Q8IWT3 2517 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 MYO9BQ13459 2157 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 EPB41L2O43491 1005 aaKnown RBP14.53□□□□□ -0.08
SNX6-207ENST00000556303 CCL23P55773 120 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 NEDD9Q14511 834 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 RETREG2Q8NC44 543 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 SMARCC2Q8TAQ2 1214 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 KAT2BQ92831 832 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 KCNB2Q92953 911 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 INPP4AQ96PE3 977 aaPredicted RBP14.53□□□□□ -0.08
SNX6-207ENST00000556303 SENP7Q9BQF6 1050 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 WNT8AQ9H1J5 351 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 NOD1Q9Y239 953 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 EYSQ5T1H1 3165 aa14.53□□□□□ -0.08
SNX6-207ENST00000556303 UMODL1Q5DID0 1318 aa14.52□□□□□ -0.08
SNX6-207ENST00000556303 HAS3O00219 553 aa14.52□□□□□ -0.09
SNX6-207ENST00000556303 MEIS2O14770 477 aa14.52□□□□□ -0.09
SNX6-207ENST00000556303 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms