RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 B4DLN1 442 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 GPR25O00155 361 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 ADAMTS3O15072 1205 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 TRAPPC10P48553 1259 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 USP11P51784 963 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 FCGRTP55899 365 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 GRB14Q14449 540 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 FAM133AQ8N9E0 248 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 DNERQ8NFT8 737 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 NSUN6Q8TEA1 469 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 ANO3Q9BYT9 981 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 SLC5A4Q9NY91 659 aa11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 NOL7Q9UMY1 257 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-213ENST00000556284 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 DNAJC25-GNG10A0A024R161 153 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 TNPO2O14787 897 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 ADORA2AP29274 412 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 SREBF1P36956 1147 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 PSMC4P43686 418 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 ARHGEF6Q15052 776 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 RILPL1Q5EBL4 403 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 MORN1Q5T089 497 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 ATL3Q6DD88 541 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 TBCKQ8TEA7 893 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 TAAR1Q96RJ0 339 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 NAP1L4Q99733 375 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 COL20A1Q9P218 1284 aa11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 ADD3Q9UEY8 706 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 DIS3Q9Y2L1 958 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-213ENST00000556284 FRMPD4Q14CM0 1322 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 FKTNO75072 461 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 GNRH1P01148 92 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 CYP3A4P08684 503 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 ARHGAP4P98171 946 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 CNTN2Q02246 1040 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 INF2Q27J81 1249 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 ARHGEF16Q5VV41 709 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 DPP9Q86TI2 863 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 CRYGNQ8WXF5 182 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 USP6NLQ92738 828 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 PGBD1Q96JS3 809 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 ZNF396Q96N95 335 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 IWS1Q96ST2 819 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 PXMP2Q9NR77 195 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 GJD2Q9UKL4 321 aa11.44□□□□□ -0.58
MTHFD1-213ENST00000556284 CYP3A7-CYP3A51PA0A087WV96 503 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 ASB14A6NK59 587 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 MAP3K7O43318 606 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 COBLO75128 1261 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 PGK2P07205 417 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 HOXC6P09630 235 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 CYP3A7P24462 503 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 HOXD10P28358 340 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 CIITAP33076 1130 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 TOB1P50616 345 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 MOXD1Q6UVY6 613 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 NEK8Q86SG6 692 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 VSIG10LQ86VR7 867 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 TRIM47Q96LD4 638 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 PDCD2LQ9BRP1 358 aa11.43□□□□□ -0.58
MTHFD1-213ENST00000556284 STAM2O75886 525 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 NR3C2P08235 984 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 GCFC2P16383 781 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 EIF2AK2P19525 551 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 CTGFP29279 349 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 CCND2P30279 289 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 ZNF76P36508 570 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 RGS2P41220 211 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 ALDH5A1P51649 535 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 PGM5Q15124 567 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 LETM2Q2VYF4 491 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
MTHFD1-213ENST00000556284 MORC4Q8TE76 937 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms