RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 MAP4K1Q92918 833 aa25.05■■□□□ 1.6
SDR39U1-216ENST00000556175 RIOX1Q9H6W3 641 aa25.05■■□□□ 1.6
SDR39U1-216ENST00000556175 DDX41Q9UJV9 622 aaKnown RBP25.05■■□□□ 1.6
SDR39U1-216ENST00000556175 SLC4A7Q9Y6M7 1214 aa25.05■■□□□ 1.6
SDR39U1-216ENST00000556175 TROAPQ12815 778 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 DGKDQ16760 1214 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 TMEM67Q5HYA8 995 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 STOX1Q6ZVD7 989 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 CHST3Q7LGC8 479 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 CCDC155Q8N6L0 562 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 PIGSQ96S52 555 aa25.04■■□□□ 1.6
SDR39U1-216ENST00000556175 ACTN1P12814 892 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 CHMP4BP1P59074 171 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 LAMC2Q13753 1193 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 SESTD1Q86VW0 696 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 GAS2L1Q99501 681 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 PDCD2LQ9BRP1 358 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 KATNAL1Q9BW62 490 aa25.03■■□□□ 1.6
SDR39U1-216ENST00000556175 PNMA6FA0A0J9YX94 578 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 ZBBXA8MT70 800 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 GCOM1H8Y6P7 765 aaPredicted RBP25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 POLR2MP0CAP2 368 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 PPTC7Q8NI37 304 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 SLC28A3Q9HAS3 691 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 RBM8AQ9Y5S9 174 aaKnown RBP25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 TANC1Q9C0D5 1861 aa25.02■■□□□ 1.6
SDR39U1-216ENST00000556175 MYCLP12524 364 aaPredicted RBP25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 HOXA13P31271 388 aaPredicted RBP25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 PTGISQ16647 500 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 DEFB128Q7Z7B8 93 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 DHX37Q8IY37 1157 aaKnown RBP25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 MB21D2Q8IYB1 491 aaPredicted RBP25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 CAGE1Q8TC20 777 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 MAP3K14Q99558 947 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 MTA3Q9BTC8 594 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 SENP2Q9HC62 589 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 TAF6LQ9Y6J9 622 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 EYSQ5T1H1 3165 aa25.01■■□□□ 1.59
SDR39U1-216ENST00000556175 CCND2P30279 289 aa25■■□□□ 1.59
SDR39U1-216ENST00000556175 KIF5BP33176 963 aa25■■□□□ 1.59
SDR39U1-216ENST00000556175 PGM5Q15124 567 aa25■■□□□ 1.59
SDR39U1-216ENST00000556175 CASC1Q6TDU7 716 aa25■■□□□ 1.59
SDR39U1-216ENST00000556175 VSIG10LQ86VR7 867 aa25■■□□□ 1.59
SDR39U1-216ENST00000556175 CTCFLQ8NI51 663 aaPredicted RBP25■■□□□ 1.59
SDR39U1-216ENST00000556175 CYTH3O43739 400 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 DDAH1O94760 285 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 IQCF3P0C7M6 154 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 ATP2A2P16615 1042 aaKnown RBP24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 ANTXR2P58335 489 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 SLC35G1Q2M3R5 365 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 C7orf31Q8N865 590 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 IGDCC4Q8TDY8 1250 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 AFAP1L1Q8TED9 768 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 PPP1R13LQ8WUF5 828 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 KAT2BQ92831 832 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 VWCEQ96DN2 955 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 NKX2-4Q9H2Z4 354 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 PCDHA11Q9Y5I1 949 aa24.99■■□□□ 1.59
SDR39U1-216ENST00000556175 TGFB3P10600 412 aa24.98■■□□□ 1.59
SDR39U1-216ENST00000556175 CHD9Q3L8U1 2897 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 F2P00734 622 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 PSEN2P49810 448 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 FCHSD1Q86WN1 690 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 ZNF654Q8IZM8 581 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 TMTC2Q8N394 836 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 LZTS2Q9BRK4 669 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 COL25A1Q9BXS0 654 aaPredicted RBP24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 FTOQ9C0B1 505 aaKnown RBP eCLIP24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 PRDM12Q9H4Q4 367 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 LY9Q9HBG7 655 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 GTF2IRD1Q9UHL9 959 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 YBX2Q9Y2T7 364 aaKnown RBP24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 GBF1Q92538 1859 aa24.97■■□□□ 1.59
SDR39U1-216ENST00000556175 PPFIA4O75335 1185 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 STAM2O75886 525 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 RGS20O76081 388 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 PARNO95453 639 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SMARCA1P28370 1054 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 MCM5P33992 734 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 MFSD10Q14728 455 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 GNPTABQ3T906 1256 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 CELF3Q5SZQ8 465 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 MYSM1Q5VVJ2 828 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 GDF6Q6KF10 455 aaPredicted RBP24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 RRP36Q96EU6 259 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SPATA33Q96N06 139 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SLC9A7Q96T83 725 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SPZ1Q9BXG8 430 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SEC63Q9UGP8 760 aaKnown RBP24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 SCN5AQ14524 2016 aa24.96■■□□□ 1.59
SDR39U1-216ENST00000556175 BAZ2BQ9UIF8 2168 aaKnown RBP24.95■■□□□ 1.59
SDR39U1-216ENST00000556175 PRC1O43663 620 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 BAIAP3O94812 1187 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 GGPS1O95749 300 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 HOXD8P13378 290 aaPredicted RBP24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 GNAQP50148 359 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 KIAA0753Q2KHM9 967 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 PPP2R2DQ66LE6 453 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 IL31RAQ8NI17 732 aa24.95■■□□□ 1.58
SDR39U1-216ENST00000556175 PHOSPHO2Q8TCD6 241 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms