RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
GABRB3-210ENST00000556166 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FAM86B2P0C5J1 330 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 PTGS1P23219 599 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 CCND2P30279 289 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 RESTQ13127 1097 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 STXBP2Q15833 593 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 MAP3K21Q5TCX8 1036 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-210ENST00000556166 UBIAD1Q9Y5Z9 338 aa13.08□□□□□ -0.32
GABRB3-210ENST00000556166 HMGCRP04035 888 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 INHAP05111 366 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CIITAP33076 1130 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 USP11P51784 963 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
GABRB3-210ENST00000556166 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 IGLV3-22A0A075B6J6 115 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 MEIS1O00470 390 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 ADCY6O43306 1168 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 TDP2O95551 362 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CYBAP13498 195 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CYP3A7P24462 503 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-210ENST00000556166 NBR1Q14596 966 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 FAM173BQ6P4H8 233 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 SEPT14Q6ZU15 432 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 LENG9Q96B70 501 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-210ENST00000556166 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 MCOLN1Q9GZU1 580 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 EHMT1Q9H9B1 1298 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
GABRB3-210ENST00000556166 CENPFP49454 3210 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-210ENST00000556166 RBM47A0AV96 593 aaKnown RBP13.06□□□□□ -0.32
GABRB3-210ENST00000556166 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 B4DLN1 442 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 SPATA31C2B4DYI2 1134 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 ARIH2O95376 493 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 BRD1O95696 1058 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-210ENST00000556166 ARP10275 920 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 ATP2B1P20020 1258 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 SP2Q02086 613 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 LETM2Q2VYF4 491 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 MBOAT7Q96N66 472 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 VTA1Q9NP79 307 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-210ENST00000556166 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
GABRB3-210ENST00000556166 SLC37A4O43826 429 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 ATP9AO75110 1047 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 ADCYAP1R1P41586 468 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
GABRB3-210ENST00000556166 MTFR1Q15390 333 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 GJC2Q5T442 439 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-210ENST00000556166 COL13A1Q5TAT6 717 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-210ENST00000556166 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-210ENST00000556166 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
GABRB3-210ENST00000556166 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
GABRB3-210ENST00000556166 STAM2O75886 525 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-210ENST00000556166 SMPD1P17405 629 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 ICAM3P32942 547 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 ZNF76P36508 570 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 ZNF174Q15697 407 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 LY6KQ17RY6 165 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 PRR16Q569H4 304 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 COPS5Q92905 334 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 GJA10Q969M2 543 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-210ENST00000556166 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
GABRB3-210ENST00000556166 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
GABRB3-210ENST00000556166 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms