RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CA3P07451 260 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 FDX1P10109 184 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 CYP2C9P11712 490 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 BMP1P13497 986 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 GNAT2P19087 354 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 NDUFV2P19404 249 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 SLC1A4P43007 532 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 SERPINB4P48594 390 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 SNAP25P60880 206 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 TTLL4Q14679 1199 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 TMEM63BQ5T3F8 832 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 IQSEC1Q6DN90 963 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 FAM160B2Q86V87 743 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 KBTBD3Q8NAB2 608 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 CHURC1Q8WUH1 139 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 STAG1Q8WVM7 1258 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 C1QTNF1Q9BXJ1 281 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 ALDH8A1Q9H2A2 487 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-220ENST00000556164 CERS4Q9HA82 394 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 ECHDC1Q9NTX5 307 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 ZBTB40Q9NUA8 1239 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 TRMT13Q9NUP7 481 aaKnown RBP6.9□□□□□ -1.3
PRKCH-220ENST00000556164 SYNPO2Q9UMS6 1093 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 ZNF536O15090 1300 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 PLIN4Q96Q06 1357 aa6.9□□□□□ -1.31
PRKCH-220ENST00000556164 MYH6P13533 1939 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 ERC2O15083 957 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 SLC3A2P08195 630 aaKnown RBP6.89□□□□□ -1.31
PRKCH-220ENST00000556164 PFKMP08237 780 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 MYL3P08590 195 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 ACTN1P12814 892 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 MCCP23508 829 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-220ENST00000556164 USP46P62068 366 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 TFAP4Q01664 338 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 PDE4BQ07343 736 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 TSHZ3Q63HK5 1081 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 KRT40Q6A162 431 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 NEDD1Q8NHV4 660 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 GPATCH3Q96I76 525 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
PRKCH-220ENST00000556164 NACAP1Q9BZK3 213 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 VTA1Q9NP79 307 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 CYP39A1Q9NYL5 469 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 CCPG1Q9ULG6 757 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 TRPC6Q9Y210 931 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 Q9Y3F1 56 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 HCN4Q9Y3Q4 1203 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 MTCH2Q9Y6C9 303 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 TNKSO95271 1327 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
PRKCH-220ENST00000556164 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 KIAA1217Q5T5P2 1943 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 SIP14410 1827 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 EPOPA6NHQ4 379 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 ZFYP08048 801 aaPredicted RBP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 SUPT20HL2P0C7V6 817 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 CPT1AP50416 773 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 PURAQ00577 322 aaKnown RBP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 PPARAQ07869 468 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 SWI5Q1ZZU3 235 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 CCDC96Q2M329 555 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 DUSP28Q4G0W2 176 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 RNF135Q8IUD6 432 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 OR6J1Q8NGC5 347 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 ARNTL2Q8WYA1 636 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 VWCEQ96DN2 955 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 PHF12Q96QT6 1004 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 WDR11Q9BZH6 1224 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 FTOQ9C0B1 505 aaKnown RBP eCLIP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 NAPBQ9H115 298 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 EPHX3Q9H6B9 360 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 PRR12Q9ULL5 1215 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 STX8Q9UNK0 236 aa6.88□□□□□ -1.31
PRKCH-220ENST00000556164 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
PRKCH-220ENST00000556164 RAD50Q92878 1312 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 TSPY2A6NKD2 308 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 KIF28PB7ZC32 967 aa6.87□□□□□ -1.31
PRKCH-220ENST00000556164 NMT2O60551 498 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms