RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 NR3C2P08235 984 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 CASTP20810 708 aaKnown RBP21.9■■□□□ 1.1
CDKN3-209ENST00000556102 HSD17B4P51659 736 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 CHMP4BP1P59074 171 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 TRDNQ13061 729 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 PPP2R2DQ66LE6 453 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 CHST3Q7LGC8 479 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 SESTD1Q86VW0 696 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 PPM1EQ8WY54 764 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 MAD2L2Q9UI95 211 aa21.9■■□□□ 1.1
CDKN3-209ENST00000556102 DDX41Q9UJV9 622 aaKnown RBP21.9■■□□□ 1.1
CDKN3-209ENST00000556102 BAZ2BQ9UIF8 2168 aaKnown RBP21.89■■□□□ 1.1
CDKN3-209ENST00000556102 PALM3A6NDB9 673 aaPredicted RBP21.89■■□□□ 1.09
CDKN3-209ENST00000556102 ZBTB5O15062 677 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 MYOGP15173 224 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 PTGISQ16647 500 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 TJAP1Q5JTD0 557 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 CCDC155Q8N6L0 562 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 RUFY2Q8WXA3 655 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 KAT2BQ92831 832 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 EMID1Q96A84 441 aaPredicted RBP21.89■■□□□ 1.09
CDKN3-209ENST00000556102 PRDM6Q9NQX0 595 aa21.89■■□□□ 1.09
CDKN3-209ENST00000556102 MAP3K20Q9NYL2 800 aaKnown RBP21.89■■□□□ 1.09
CDKN3-209ENST00000556102 PPP1R11O60927 126 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-209ENST00000556102 IGFBP4P22692 258 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 DGKDQ16760 1214 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 CAGE1Q8TC20 777 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 SLC9A7Q96T83 725 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 PCDHA1Q9Y5I3 950 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 MRVI1Q9Y6F6 885 aa21.88■■□□□ 1.09
CDKN3-209ENST00000556102 U3KPZ7 1027 aaPredicted RBP21.88■■□□□ 1.09
CDKN3-209ENST00000556102 CYP21A2P08686 494 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 LAMC2Q13753 1193 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 TMEM67Q5HYA8 995 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 GDF6Q6KF10 455 aaPredicted RBP21.87■■□□□ 1.09
CDKN3-209ENST00000556102 SAMD3Q8N6K7 520 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 PHOSPHO2Q8TCD6 241 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 AFAP1L1Q8TED9 768 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 CTAGE1Q96RT6 745 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 PDCD2LQ9BRP1 358 aa21.87■■□□□ 1.09
CDKN3-209ENST00000556102 FTOQ9C0B1 505 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDKN3-209ENST00000556102 CHMLP26374 656 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 PTH1RQ03431 593 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 TRAF1Q13077 416 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 GRM4Q14833 912 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 STOX1Q6ZVD7 989 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 PPTC7Q8NI37 304 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 ATXN2LQ8WWM7 1075 aaKnown RBP21.86■■□□□ 1.09
CDKN3-209ENST00000556102 KATNAL1Q9BW62 490 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 THEGQ9P2T0 379 aa21.86■■□□□ 1.09
CDKN3-209ENST00000556102 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
CDKN3-209ENST00000556102 ERICH2A1L162 156 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 IFIT3O14879 490 aaKnown RBP21.85■■□□□ 1.09
CDKN3-209ENST00000556102 BAIAP3O94812 1187 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 MYCLP12524 364 aaPredicted RBP21.85■■□□□ 1.09
CDKN3-209ENST00000556102 PSEN2P49810 448 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 SLC35G1Q2M3R5 365 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 RALYLQ86SE5 291 aaKnown RBP21.85■■□□□ 1.09
CDKN3-209ENST00000556102 HOMER1Q86YM7 354 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 DHX37Q8IY37 1157 aaKnown RBP21.85■■□□□ 1.09
CDKN3-209ENST00000556102 RIOX1Q9H6W3 641 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 GTF2IRD1Q9UHL9 959 aa21.85■■□□□ 1.09
CDKN3-209ENST00000556102 PTPRSQ13332 1948 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 RGS20O76081 388 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 F2P00734 622 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 CA3P07451 260 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 HOXA13P31271 388 aaPredicted RBP21.84■■□□□ 1.09
CDKN3-209ENST00000556102 RBL2Q08999 1139 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 PGM5Q15124 567 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 CCDC85BQ15834 202 aaPredicted RBP21.84■■□□□ 1.09
CDKN3-209ENST00000556102 KCNV1Q6PIU1 500 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 C7orf31Q8N865 590 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 DHX38Q92620 1227 aaKnown RBP21.84■■□□□ 1.09
CDKN3-209ENST00000556102 PIGSQ96S52 555 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 HDAC6Q9UBN7 1215 aa21.84■■□□□ 1.09
CDKN3-209ENST00000556102 E7EWF7 191 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 HAS3O00219 553 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 PARNO95453 639 aaKnown RBP21.83■■□□□ 1.09
CDKN3-209ENST00000556102 HOXD8P13378 290 aaPredicted RBP21.83■■□□□ 1.09
CDKN3-209ENST00000556102 SELPP16109 830 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 MFSD10Q14728 455 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 WTAPQ15007 396 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 SART3Q15020 963 aaKnown RBP21.83■■□□□ 1.09
CDKN3-209ENST00000556102 LRRC8DQ7L1W4 858 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 VSIG10LQ86VR7 867 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 HERC6Q8IVU3 1022 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 NCOA7Q8NI08 942 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 IL31RAQ8NI17 732 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 ALG1Q9BT22 464 aa21.83■■□□□ 1.09
CDKN3-209ENST00000556102 TRANK1O15050 2925 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 GCOM1H8Y6P7 765 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-209ENST00000556102 CYTH3O43739 400 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 POLR2MP0CAP2 368 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 ZNF286BP0CG31 522 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 TROAPQ12815 778 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 KIAA0753Q2KHM9 967 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 CELF3Q5SZQ8 465 aaKnown RBP21.82■■□□□ 1.08
CDKN3-209ENST00000556102 MYSM1Q5VVJ2 828 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 SENP2Q9HC62 589 aa21.82■■□□□ 1.08
CDKN3-209ENST00000556102 TAF6LQ9Y6J9 622 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms