RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PPTC7Q8NI37 304 aa14.74□□□□□ -0.05
HNRNPC-221ENST00000555883 IGDCC4Q8TDY8 1250 aa14.74□□□□□ -0.05
HNRNPC-221ENST00000555883 VWCEQ96DN2 955 aa14.74□□□□□ -0.05
HNRNPC-221ENST00000555883 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
HNRNPC-221ENST00000555883 DDX41Q9UJV9 622 aaKnown RBP14.74□□□□□ -0.05
HNRNPC-221ENST00000555883 VCANP13611 3396 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 PNMA6FA0A0J9YX94 578 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CYTH3O43739 400 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CYP2C9P11712 490 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 HOXD8P13378 290 aaPredicted RBP14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 EIF2AK2P19525 551 aaKnown RBP14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CASTP20810 708 aaKnown RBP14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 RBL2Q08999 1139 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 BFSP2Q13515 415 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 LAMC2Q13753 1193 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 GRIN2CQ14957 1233 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 LY6KQ17RY6 165 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 SLC35G1Q2M3R5 365 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CATIPQ7Z7H3 387 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 VSIG10LQ86VR7 867 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CAGE1Q8TC20 777 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 AFG1LQ8WV93 481 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 KATNAL1Q9BW62 490 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 CXXC1Q9P0U4 656 aaPredicted RBP14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 MSRAQ9UJ68 235 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 TAF6LQ9Y6J9 622 aa14.73□□□□□ -0.05
HNRNPC-221ENST00000555883 FRMPD4Q14CM0 1322 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 CHD7Q9P2D1 2997 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 GCOM1H8Y6P7 765 aaPredicted RBP14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 STAM2O75886 525 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 DDAH1O94760 285 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 PARNO95453 639 aaKnown RBP14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 F2P00734 622 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 POLR2MP0CAP2 368 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 ANTXR2P58335 489 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 PGM5Q15124 567 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 FAM47CQ5HY64 1035 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 TMEM67Q5HYA8 995 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 OTOP2Q7RTS6 562 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 TMTC2Q8N394 836 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 CCDC155Q8N6L0 562 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 KAT2BQ92831 832 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 PIGSQ96S52 555 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 SPZ1Q9BXG8 430 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 RBM8AQ9Y5S9 174 aaKnown RBP14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 MRVI1Q9Y6F6 885 aa14.72□□□□□ -0.05
HNRNPC-221ENST00000555883 KIAA1217Q5T5P2 1943 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 GRXCR1A8MXD5 290 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 PPFIA4O75335 1185 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 RGS20O76081 388 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 IQCF3P0C7M6 154 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 KIF5BP33176 963 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 PBX2P40425 430 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 HOMER1Q86YM7 354 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 RETREG2Q8NC44 543 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 AFAP1L1Q8TED9 768 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 SCLYQ96I15 445 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 TMEM87BQ96K49 555 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 LZTS2Q9BRK4 669 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 LY9Q9HBG7 655 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 SENP2Q9HC62 589 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 SLC4A7Q9Y6M7 1214 aa14.71□□□□□ -0.05
HNRNPC-221ENST00000555883 MYH6P13533 1939 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 SPTBN5Q9NRC6 3674 aaKnown RBP14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 HAS3O00219 553 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 ACTN1P12814 892 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 CCND2P30279 289 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 PTGISQ16647 500 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 MYSM1Q5VVJ2 828 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 DHX37Q8IY37 1157 aaKnown RBP14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 PHOSPHO2Q8TCD6 241 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 CTAGE1Q96RT6 745 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 LSG1Q9H089 658 aaKnown RBP14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 SLC28A3Q9HAS3 691 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 GTF2IRD1Q9UHL9 959 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 NOD1Q9Y239 953 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 PCDHA11Q9Y5I1 949 aa14.7□□□□□ -0.06
HNRNPC-221ENST00000555883 TANC1Q9C0D5 1861 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 CUL9Q8IWT3 2517 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 PIK3CDO00329 1044 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 BAIAP3O94812 1187 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 ATP2A2P16615 1042 aaKnown RBP14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 HOXA13P31271 388 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 MCM5P33992 734 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 LIFRP42702 1097 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 GNAQP50148 359 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 CELF3Q5SZQ8 465 aaKnown RBP14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 CASC1Q6TDU7 716 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 CHST3Q7LGC8 479 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 ZNF654Q8IZM8 581 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 CTCFLQ8NI51 663 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 GAS2L1Q99501 681 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 ESYT1Q9BSJ8 1104 aa14.69□□□□□ -0.06
HNRNPC-221ENST00000555883 PRC1O43663 620 aa14.68□□□□□ -0.06
HNRNPC-221ENST00000555883 CALM1P0DP23 149 aa14.68□□□□□ -0.06
HNRNPC-221ENST00000555883 CALM2P0DP24 149 aa14.68□□□□□ -0.06
HNRNPC-221ENST00000555883 CALM3P0DP25 149 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms