RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 TRMT13Q9NUP7 481 aaKnown RBP17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 SEC63Q9UGP8 760 aaKnown RBP17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
EFCAB11-207ENST00000555608 LAMA2P24043 3122 aaKnown RBP17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 A6NJR5 290 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 RGS20O76081 388 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 CPA1P15085 419 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 CSF2RAP15509 400 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 TRAF1Q13077 416 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 MFSD5Q6N075 450 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 GPKOWQ92917 476 aaPredicted RBP eCLIP17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
EFCAB11-207ENST00000555608 SCN5AQ14524 2016 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 CALM1P0DP23 149 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 CALM2P0DP24 149 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 CALM3P0DP25 149 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 ACRP10323 421 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 CCND2P30279 289 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 GNAQP50148 359 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 NBPF20Q3BBV1 942 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 TMTC3Q6ZXV5 915 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
EFCAB11-207ENST00000555608 CYP2C9P11712 490 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 CCL23P55773 120 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 PPIGQ13427 754 aaKnown RBP eCLIP17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 SAMD3Q8N6K7 520 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 FAM161BQ96MY7 647 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 NOC4LQ9BVI4 516 aaKnown RBP17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 WNT8AQ9H1J5 351 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 FRMPD4Q14CM0 1322 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
EFCAB11-207ENST00000555608 GBF1Q92538 1859 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 ZNF286BP0CG31 522 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 SYNE3Q6ZMZ3 975 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 C16orf59Q7L2K0 433 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 VSIG10LQ86VR7 867 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 SMARCC2Q8TAQ2 1214 aa17.14■□□□□ 0.33
EFCAB11-207ENST00000555608 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 MEIS2O14770 477 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 KPNA6O60684 536 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 GGPS1O95749 300 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 MRPS9P82933 396 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 KRT32Q14532 448 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 UBE2SQ16763 222 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 DHX37Q8IY37 1157 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 KAT2BQ92831 832 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 CUL5Q93034 780 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 SCLYQ96I15 445 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 NAP1L2Q9ULW6 460 aaPredicted RBP17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 STXBP5LQ9Y2K9 1186 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
EFCAB11-207ENST00000555608 ZBTB43O43298 467 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 HSPA4P34932 840 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 SP2Q02086 613 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 RTN1Q16799 776 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 FAM109BQ6ICB4 259 aaPredicted RBP17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 ALG1Q9BT22 464 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 IL23AQ9NPF7 189 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
EFCAB11-207ENST00000555608 APOBRQ0VD83 1088 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 DGKDQ16760 1214 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 CELF3Q5SZQ8 465 aaKnown RBP17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 ZNF697Q5TEC3 545 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 WWC2Q6AWC2 1192 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 PPTC7Q8NI37 304 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 KCNB2Q92953 911 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 RBM28Q9NW13 759 aaKnown RBP17.11■□□□□ 0.33
EFCAB11-207ENST00000555608 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
EFCAB11-207ENST00000555608 DLL1O00548 723 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms