RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 HSD17B4P51659 736 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 RASGRP4Q8TDF6 673 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 ARMC5Q96C12 935 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.26□□□□□ -0.61
PSEN1-213ENST00000555386 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 MYH7BA7E2Y1 1941 aa11.26□□□□□ -0.61
PSEN1-213ENST00000555386 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 MEIS2O14770 477 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 PTGS1P23219 599 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 UBE2HP62256 183 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 HS1BP3Q53T59 392 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 FAM184AQ8NB25 1140 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 IL31RAQ8NI17 732 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 C6orf50Q9HD87 102 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 RIC8AQ9NPQ8 531 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 RPTORQ8N122 1335 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 SORBS3O60504 671 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 CYBAP13498 195 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 CLCN1P35523 988 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 ACVR2BQ13705 512 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 SEPT14Q6ZU15 432 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-213ENST00000555386 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 WASF1Q92558 559 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 RTEL1Q9NZ71 1219 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 SYNGAP1Q96PV0 1343 aa11.25□□□□□ -0.61
PSEN1-213ENST00000555386 DOCK5Q9H7D0 1870 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 TCHHQ07283 1943 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 STK36Q9NRP7 1315 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 B4DLN1 442 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 TFRCP02786 760 aaKnown RBP11.24□□□□□ -0.61
PSEN1-213ENST00000555386 NR3C2P08235 984 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 XBP1P17861 261 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 TRIM29Q14134 588 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 PGM5Q15124 567 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 GJC2Q5T442 439 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-213ENST00000555386 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
PSEN1-213ENST00000555386 UIMC1Q96RL1 719 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 RBSNQ9H1K0 784 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 ABHD16BQ9H3Z7 469 aa11.24□□□□□ -0.61
PSEN1-213ENST00000555386 RRAGDQ9NQL2 400 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-213ENST00000555386 FRMPD3Q5JV73 1810 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 LRRC37A2A6NM11 1700 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 SYCE3A1L190 88 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 ESPNB1AK53 854 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 PIK3CDO00329 1044 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 ZNF865P0CJ78 1059 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 EN2P19622 333 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 GNA11P29992 359 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 CCND2P30279 289 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 NUBP1P53384 320 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 STXBP2Q15833 593 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 TMEM63BQ5T3F8 832 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 CCDC183Q5T5S1 534 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 LARP1BQ659C4 914 aaKnown RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 MSL3Q8N5Y2 521 aaKnown RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 PDLIM2Q96JY6 352 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 ANO3Q9BYT9 981 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
PSEN1-213ENST00000555386 FAM184BQ9ULE4 1060 aa11.23□□□□□ -0.61
PSEN1-213ENST00000555386 ELP1O95163 1332 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
PSEN1-213ENST00000555386 SEPT4O43236 478 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 ZNF76P36508 570 aa11.22□□□□□ -0.61
PSEN1-213ENST00000555386 GHRHRQ02643 423 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms