RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TTLL4Q14679 1199 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 DUSP28Q4G0W2 176 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 TLK2Q86UE8 772 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 VSIG10LQ86VR7 867 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 NECAB1Q8N987 351 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 GTF3C6Q969F1 213 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 AP5M1Q9H0R1 490 aa23.52■■□□□ 1.36
FOXN3-209ENST00000555353 GNEQ9Y223 722 aaKnown RBP23.52■■□□□ 1.36
FOXN3-209ENST00000555353 FRMPD4Q14CM0 1322 aa23.51■■□□□ 1.35
FOXN3-209ENST00000555353 LARGE1O95461 756 aa23.51■■□□□ 1.35
FOXN3-209ENST00000555353 EHMT1Q9H9B1 1298 aa23.51■■□□□ 1.35
FOXN3-209ENST00000555353 C6orf50Q9HD87 102 aa23.51■■□□□ 1.35
FOXN3-209ENST00000555353 TNRC18O15417 2968 aaPredicted RBP23.5■■□□□ 1.35
FOXN3-209ENST00000555353 ESYT2A0FGR8 921 aa23.5■■□□□ 1.35
FOXN3-209ENST00000555353 TXNP10599 105 aaKnown RBP23.5■■□□□ 1.35
FOXN3-209ENST00000555353 GJA9P57773 515 aa23.5■■□□□ 1.35
FOXN3-209ENST00000555353 UPF3AQ9H1J1 476 aaKnown RBP23.5■■□□□ 1.35
FOXN3-209ENST00000555353 Q9Y3F1 56 aa23.5■■□□□ 1.35
FOXN3-209ENST00000555353 NKRFO15226 690 aaKnown RBP eCLIP23.49■■□□□ 1.358e-7■■■□□ 18.4
FOXN3-209ENST00000555353 DYNC1LI2O43237 492 aaPredicted RBP23.49■■□□□ 1.35
FOXN3-209ENST00000555353 COL6A1P12109 1028 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 GNA11P29992 359 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 GNASQ5JWF2 1037 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 IPO9Q96P70 1041 aaKnown RBP23.49■■□□□ 1.35
FOXN3-209ENST00000555353 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
FOXN3-209ENST00000555353 ZMYND12Q9H0C1 365 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 SH3GLB2Q9NR46 395 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 VPS54Q9P1Q0 977 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 PCDHA6Q9UN73 950 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.49■■□□□ 1.35
FOXN3-209ENST00000555353 PCDHA8Q9Y5H6 950 aa23.49■■□□□ 1.35
FOXN3-209ENST00000555353 STAM2O75886 525 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 FOSP01100 380 aaPredicted RBP23.48■■□□□ 1.35
FOXN3-209ENST00000555353 CUL4AQ13619 759 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 TMEM63BQ5T3F8 832 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 PCNX4Q63HM2 1172 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 CCDC83Q8IWF9 413 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 PCSK9Q8NBP7 692 aaKnown RBP23.48■■□□□ 1.35
FOXN3-209ENST00000555353 KLHDC9Q8NEP7 349 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 MRVI1Q9Y6F6 885 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 STK36Q9NRP7 1315 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 MYADML2A6NDP7 307 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 CST5P28325 142 aaPredicted RBP23.48■■□□□ 1.35
FOXN3-209ENST00000555353 GNPTABQ3T906 1256 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 XRRA1Q6P2D8 792 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 BICD2Q8TD16 824 aa23.48■■□□□ 1.35
FOXN3-209ENST00000555353 TSEN34Q9BSV6 310 aaKnown RBP23.48■■□□□ 1.35
FOXN3-209ENST00000555353 PTGS1P23219 599 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 FSCN1Q16658 493 aaKnown RBP23.47■■□□□ 1.35
FOXN3-209ENST00000555353 CCDC62Q6P9F0 684 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 KCNV1Q6PIU1 500 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 REXO1Q8N1G1 1221 aaKnown RBP23.47■■□□□ 1.35
FOXN3-209ENST00000555353 DPF3Q92784 378 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
FOXN3-209ENST00000555353 ZFP91Q96JP5 570 aaPredicted RBP23.47■■□□□ 1.35
FOXN3-209ENST00000555353 PHF24Q9UPV7 400 aa23.47■■□□□ 1.35
FOXN3-209ENST00000555353 MOXD2PA6NHM9 499 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 ARIH2O95376 493 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 CTDNEP1O95476 244 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 NLRP5P59047 1200 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 NKX3-2P78367 333 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 MRPS9P82933 396 aaKnown RBP23.46■■□□□ 1.35
FOXN3-209ENST00000555353 KCNA10Q16322 511 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 OR6J1Q8NGC5 347 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 FERMT2Q96AC1 680 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 LLPHQ9BRT6 129 aaKnown RBP23.46■■□□□ 1.35
FOXN3-209ENST00000555353 ANO3Q9BYT9 981 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 RTEL1Q9NZ71 1219 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 ORC3Q9UBD5 711 aaPredicted RBP23.46■■□□□ 1.35
FOXN3-209ENST00000555353 MYH7BA7E2Y1 1941 aa23.46■■□□□ 1.35
FOXN3-209ENST00000555353 DNAH12Q6ZR08 3092 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 ZEB2O60315 1214 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 RGS20O76081 388 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 ACLYP53396 1101 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 IRX5P78411 483 aaPredicted RBP23.45■■□□□ 1.34
FOXN3-209ENST00000555353 BEX3Q00994 111 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 LY6KQ17RY6 165 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 BRDTQ58F21 947 aaPredicted RBP23.45■■□□□ 1.34
FOXN3-209ENST00000555353 JAKMIP3Q5VZ66 844 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 MCTP2Q6DN12 878 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 WASF1Q92558 559 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 COPS5Q92905 334 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 TMEM260Q9NX78 707 aa23.45■■□□□ 1.34
FOXN3-209ENST00000555353 XBP1P17861 261 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 CLK2P49760 499 aaKnown RBP23.44■■□□□ 1.34
FOXN3-209ENST00000555353 CCSAPQ6IQ19 270 aaPredicted RBP23.44■■□□□ 1.34
FOXN3-209ENST00000555353 FAM177A1Q8N128 213 aaPredicted RBP23.44■■□□□ 1.34
FOXN3-209ENST00000555353 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 AIFM3Q96NN9 605 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 DDX41Q9UJV9 622 aaKnown RBP23.44■■□□□ 1.34
FOXN3-209ENST00000555353 ALPK3Q96L96 1907 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 CTAGE5O15320 804 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 GH1P01241 217 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 ASGR1P07306 291 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 TGFB3P10600 412 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 CPT1AP50416 773 aa23.44■■□□□ 1.34
FOXN3-209ENST00000555353 INPP4AQ96PE3 977 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms