RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 STXBP2Q15833 593 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 KCNA10Q16322 511 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 LY6KQ17RY6 165 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 DUSP28Q4G0W2 176 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 IQSEC1Q6DN90 963 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 CCDC62Q6P9F0 684 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 SAMD3Q8N6K7 520 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 ARRDC4Q8NCT1 418 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
SYNE2-214ENST00000554928 SLKQ9H2G2 1235 aaPredicted RBP14.21□□□□□ -0.13
SYNE2-214ENST00000554928 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 RIC8AQ9NPQ8 531 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 MAP3K20Q9NYL2 800 aaKnown RBP14.21□□□□□ -0.13
SYNE2-214ENST00000554928 VPS54Q9P1Q0 977 aa14.21□□□□□ -0.13
SYNE2-214ENST00000554928 KBTBD13C9JR72 458 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 SEMA3FQ13275 785 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 CUL5Q93034 780 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 GJB4Q9NTQ9 266 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 PHF24Q9UPV7 400 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
SYNE2-214ENST00000554928 ALPK3Q96L96 1907 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 A0A1W2PQ45 241 aaPredicted RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 A0A1W2PQY0 241 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 CPLX1O14810 134 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 CD2BP2O95400 341 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 CAPN2P17655 700 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 CST5P28325 142 aaPredicted RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 CLK2P49760 499 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 ADCY7P51828 1080 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 ACLYP53396 1101 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 NKX3-2P78367 333 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 SP2Q02086 613 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 SSRP1Q08945 709 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 PPP1R18Q6NYC8 613 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 RNF180Q86T96 592 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 PPP1R13LQ8WUF5 828 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 DPF3Q92784 378 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
SYNE2-214ENST00000554928 TELO2Q9Y4R8 837 aa14.19□□□□□ -0.14
SYNE2-214ENST00000554928 JAK2O60674 1132 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 ASGR1P07306 291 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 FDPSP14324 419 aaKnown RBP14.18□□□□□ -0.14
SYNE2-214ENST00000554928 CCND2P30279 289 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 ARHGAP1Q07960 439 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 ANKRD1Q15327 319 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 FSCN1Q16658 493 aaKnown RBP14.18□□□□□ -0.14
SYNE2-214ENST00000554928 GNASQ5JWF2 1037 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 JAKMIP3Q5VZ66 844 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 CXCL17Q6UXB2 119 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
SYNE2-214ENST00000554928 DNAH12Q6ZR08 3092 aa14.18□□□□□ -0.14
SYNE2-214ENST00000554928 B4DLN1 442 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 H0YGN5 161 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 MRPL12P52815 198 aaKnown RBP14.17□□□□□ -0.14
SYNE2-214ENST00000554928 RTP1P59025 263 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
SYNE2-214ENST00000554928 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 NPY5RQ15761 445 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 SLC39A5Q6ZMH5 540 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
SYNE2-214ENST00000554928 NSUN7Q8NE18 718 aaKnown RBP14.17□□□□□ -0.14
SYNE2-214ENST00000554928 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 ANO3Q9BYT9 981 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 ZMYND12Q9H0C1 365 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 AP5M1Q9H0R1 490 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
SYNE2-214ENST00000554928 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 ESYT2A0FGR8 921 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 SPDYE3A6NKU9 549 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 EDIL3O43854 480 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 DEXIO95424 95 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 ITGB5P18084 799 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 UBA1P22314 1058 aaKnown RBP14.16□□□□□ -0.14
SYNE2-214ENST00000554928 PSMC6P62333 389 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 PCNX4Q63HM2 1172 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 CCDC83Q8IWF9 413 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
SYNE2-214ENST00000554928 TSEN34Q9BSV6 310 aaKnown RBP14.16□□□□□ -0.14
SYNE2-214ENST00000554928 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
SYNE2-214ENST00000554928 ZMYND8Q9ULU4 1186 aaPredicted RBP14.16□□□□□ -0.14
SYNE2-214ENST00000554928 KCNJ14Q9UNX9 436 aa14.16□□□□□ -0.14
SYNE2-214ENST00000554928 Q9Y3F1 56 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms