RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-221ENST00000554453 VWCEQ96DN2 955 aa12.89□□□□□ -0.35
ABCD4-221ENST00000554453 TMEM87BQ96K49 555 aa12.89□□□□□ -0.35
ABCD4-221ENST00000554453 WNT8AQ9H1J5 351 aa12.89□□□□□ -0.35
ABCD4-221ENST00000554453 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
ABCD4-221ENST00000554453 SLC27A2O14975 620 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 MMP3P08254 477 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 DNAJB2P25686 324 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-221ENST00000554453 MCM5P33992 734 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 GNAQP50148 359 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 PGM5Q15124 567 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 DGKDQ16760 1214 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-221ENST00000554453 HOMER1Q86YM7 354 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 KAT2BQ92831 832 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
ABCD4-221ENST00000554453 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 PRC1O43663 620 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 DDAH1O94760 285 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-221ENST00000554453 KIF5BP33176 963 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 LIFRP42702 1097 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 SESTD1Q86VW0 696 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
ABCD4-221ENST00000554453 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 SCLYQ96I15 445 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
ABCD4-221ENST00000554453 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-221ENST00000554453 MRVI1Q9Y6F6 885 aa12.87□□□□□ -0.35
ABCD4-221ENST00000554453 COL6A3P12111 3177 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 PFKMP08237 780 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 HOXD8P13378 290 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 FCHSD1Q86WN1 690 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 RETREG2Q8NC44 543 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 TIFAQ96CG3 184 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 PBX4Q9BYU1 374 aa12.86□□□□□ -0.35
ABCD4-221ENST00000554453 LAMA2P24043 3122 aaKnown RBP12.86□□□□□ -0.35
ABCD4-221ENST00000554453 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 HAS3O00219 553 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 IQCF3P0C7M6 154 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 CALM1P0DP23 149 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 CALM2P0DP24 149 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 CALM3P0DP25 149 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 CCND2P30279 289 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 RFC2P35250 354 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 PBX2P40425 430 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 SP2Q02086 613 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 BFSP2Q13515 415 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-221ENST00000554453 PTGISQ16647 500 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
ABCD4-221ENST00000554453 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 ANO2Q9NQ90 1003 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
ABCD4-221ENST00000554453 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 DLL1O00548 723 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 MEIS2O14770 477 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 STAM2O75886 525 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 ICAM3P32942 547 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 PSEN2P49810 448 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
ABCD4-221ENST00000554453 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
ABCD4-221ENST00000554453 RAB30Q15771 203 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 GDF6Q6KF10 455 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-221ENST00000554453 SGMS1Q86VZ5 419 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 PIBF1Q8WXW3 757 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-221ENST00000554453 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 KATNAL1Q9BW62 490 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
ABCD4-221ENST00000554453 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms