RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 PPIL6Q8IXY8 311 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 SP8Q8IXZ3 490 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 PLEKHO2Q8TD55 490 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 MICAL1Q8TDZ2 1067 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 DACT3Q96B18 629 aaPredicted RBP3.71□□□□□ -1.82
IFT43-208ENST00000554423 C20orf173Q96LM9 149 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 YIPF4Q9BSR8 244 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 AARSD1Q9BTE6 412 aaKnown RBP3.71□□□□□ -1.82
IFT43-208ENST00000554423 CCDC113Q9H0I3 377 aa3.71□□□□□ -1.82
IFT43-208ENST00000554423 TRAV20A0A0B4J274 112 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 A0A1W2PQU0 124 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 KRIT1O00522 736 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 FOXD2O60548 495 aaPredicted RBP3.7□□□□□ -1.82
IFT43-208ENST00000554423 PPP1R11O60927 126 aaPredicted RBP3.7□□□□□ -1.82
IFT43-208ENST00000554423 ASGR2P07307 311 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 FGFR1P11362 822 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 BMP7P18075 431 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 NAT1P18440 290 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 GTF2F1P35269 517 aaKnown RBP eCLIP3.7□□□□□ -1.82
IFT43-208ENST00000554423 BCL6P41182 706 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 NCKAP1LP55160 1127 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 CACNB2Q08289 660 aaPredicted RBP3.7□□□□□ -1.82
IFT43-208ENST00000554423 IFRD2Q12894 506 aaPredicted RBP3.7□□□□□ -1.82
IFT43-208ENST00000554423 MRM1Q6IN84 353 aaKnown RBP3.7□□□□□ -1.82
IFT43-208ENST00000554423 NSMFQ6X4W1 530 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 ETV3LQ6ZN32 361 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 TTLL7Q6ZT98 887 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 B3GNT8Q7Z7M8 397 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 TRIM48Q8IWZ4 208 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 CELF2-AS1Q8N7Q2 184 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 LINC01356Q8N9X3 169 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 TMEM145Q8NBT3 493 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 DCAF4Q8WV16 495 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 DPF3Q92784 378 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 ZFYVE21Q9BQ24 234 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 PARD6AQ9NPB6 346 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 GPR27Q9NS67 375 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 PCDHA2Q9Y5H9 948 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 PMF1-BGLAPU3KQ54 211 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 X6R8D5 127 aa3.7□□□□□ -1.82
IFT43-208ENST00000554423 HGSO14964 777 aaPredicted RBP3.69□□□□□ -1.82
IFT43-208ENST00000554423 PDPK1O15530 556 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 PRODHO43272 600 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 SUV39H1O43463 412 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 SMARCA5O60264 1052 aaPredicted RBP3.69□□□□□ -1.82
IFT43-208ENST00000554423 CYP7B1O75881 506 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 CYP2C8P10632 490 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 IGFBP6P24592 240 aaPredicted RBP3.69□□□□□ -1.82
IFT43-208ENST00000554423 PMLP29590 882 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 NKX3-2P78367 333 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 INF2Q27J81 1249 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 MTERF2Q49AM1 385 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 ZC3H12BQ5HYM0 836 aaKnown RBP3.69□□□□□ -1.82
IFT43-208ENST00000554423 SLC35F1Q5T1Q4 408 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 USP53Q70EK8 1073 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 MILR1Q7Z6M3 343 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 TEX2Q8IWB9 1127 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 SCUBE1Q8IWY4 988 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 TMEFF1Q8IYR6 380 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 TTLL6Q8N841 843 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 KREMEN2Q8NCW0 462 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 RCBTB1Q8NDN9 531 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 PANK1Q8TE04 598 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 BORCS6Q96GS4 357 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 CDC6Q99741 560 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 IER2Q9BTL4 223 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 EPB41L1Q9H4G0 881 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 LUC7LQ9NQ29 371 aaKnown RBP3.69□□□□□ -1.82
IFT43-208ENST00000554423 CLDND1Q9NY35 253 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 NPFFR2Q9Y5X5 522 aa3.69□□□□□ -1.82
IFT43-208ENST00000554423 PABPC1P11940 636 aaKnown RBP3.68□□□□□ -1.82
IFT43-208ENST00000554423 SYN1P17600 705 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 KCNC1P48547 511 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 RBL2Q08999 1139 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 SPIRE1Q08AE8 756 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 RASGRF1Q13972 1273 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 LONRF2Q1L5Z9 754 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 KIZQ2M2Z5 673 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 STEAP3Q658P3 488 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 CYP4F22Q6NT55 531 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 Q8N1Y9 231 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 MARCH10Q8NA82 808 aaPredicted RBP3.68□□□□□ -1.82
IFT43-208ENST00000554423 PHOSPHO1Q8TCT1 267 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 ALG1Q9BT22 464 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 SPATA9Q9BWV2 254 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 LGR4Q9BXB1 951 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 PALD1Q9ULE6 856 aa3.68□□□□□ -1.82
IFT43-208ENST00000554423 AQP7O14520 342 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 GSTA4O15217 222 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 TBX1O43435 398 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 DLX3O60479 287 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 CAPNS1P04632 268 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 ATF2P15336 505 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 FBLN1P23142 703 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 LIMS1P48059 325 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 SF1Q15637 639 aaKnown RBP3.67□□□□□ -1.82
IFT43-208ENST00000554423 MBLAC2Q68D91 279 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 CD300LDQ6UXZ3 194 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 EP400NLQ6ZTU2 488 aa3.67□□□□□ -1.82
IFT43-208ENST00000554423 FAM124AQ86V42 546 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms