RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.06■□□□□ 0.8
NEK9-204ENST00000554258 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
NEK9-204ENST00000554258 FRYLO94915 3013 aa20.05■□□□□ 0.8
NEK9-204ENST00000554258 NDUFV1P49821 464 aa20.05■□□□□ 0.8
NEK9-204ENST00000554258 RBL2Q08999 1139 aa20.05■□□□□ 0.8
NEK9-204ENST00000554258 TRERF1Q96PN7 1200 aa20.05■□□□□ 0.8
NEK9-204ENST00000554258 ATP8A2Q9NTI2 1148 aa20.05■□□□□ 0.8
NEK9-204ENST00000554258 ZNF532Q9HCE3 1301 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 LINC01565O15544 149 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 PRKAB2O43741 272 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 EYA4O95677 639 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 PDGFBP01127 241 aaPredicted RBP20.04■□□□□ 0.8
NEK9-204ENST00000554258 FDX1P10109 184 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 ALAS1P13196 640 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 GTF2F1P35269 517 aaKnown RBP eCLIP20.04■□□□□ 0.8
NEK9-204ENST00000554258 TKFCQ3LXA3 575 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 MORC4Q8TE76 937 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 CYP39A1Q9NYL5 469 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 NYAP2Q9P242 653 aa20.04■□□□□ 0.8
NEK9-204ENST00000554258 A6NJR5 290 aa20.03■□□□□ 0.8
NEK9-204ENST00000554258 RBAK-RBAKDNI3L0D1 243 aa20.03■□□□□ 0.8
NEK9-204ENST00000554258 LGR5O75473 907 aa20.03■□□□□ 0.8
NEK9-204ENST00000554258 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
NEK9-204ENST00000554258 PURBQ96QR8 312 aaKnown RBP20.03■□□□□ 0.8
NEK9-204ENST00000554258 LMAN2LQ9H0V9 348 aa20.03■□□□□ 0.8
NEK9-204ENST00000554258 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
NEK9-204ENST00000554258 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.8
NEK9-204ENST00000554258 IGHDP01880 384 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 CTNNB1P35222 781 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 PPP2R5BQ15173 497 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 MSLNLQ96KJ4 702 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 RPGRIP1Q96KN7 1286 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 RIPOR3Q96MK2 946 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 INCENPQ9NQS7 918 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 CLIP2Q9UDT6 1046 aa20.02■□□□□ 0.8
NEK9-204ENST00000554258 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
NEK9-204ENST00000554258 NKRFO15226 690 aaKnown RBP eCLIP20.01■□□□□ 0.79
NEK9-204ENST00000554258 GRM6O15303 877 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 CSPG5O95196 566 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 ICAM3P32942 547 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 ADAM15Q13444 863 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 TTF1Q15361 905 aaPredicted RBP20.01■□□□□ 0.79
NEK9-204ENST00000554258 PTPN21Q16825 1174 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 NSMFQ6X4W1 530 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 SESTD1Q86VW0 696 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 SMRP1Q8NCR6 262 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 DDRGK1Q96HY6 314 aa20.01■□□□□ 0.79
NEK9-204ENST00000554258 RAB11FIP3O75154 756 aa20■□□□□ 0.79
NEK9-204ENST00000554258 UPP2O95045 317 aa20■□□□□ 0.79
NEK9-204ENST00000554258 MBTPS1Q14703 1052 aa20■□□□□ 0.79
NEK9-204ENST00000554258 MUM1L1Q5H9M0 696 aa20■□□□□ 0.79
NEK9-204ENST00000554258 ZNF618Q5T7W0 954 aa20■□□□□ 0.79
NEK9-204ENST00000554258 LRRC47Q8N1G4 583 aaKnown RBP20■□□□□ 0.79
NEK9-204ENST00000554258 EAF2Q96CJ1 260 aaPredicted RBP20■□□□□ 0.79
NEK9-204ENST00000554258 C11orf84Q9BUA3 381 aaPredicted RBP20■□□□□ 0.79
NEK9-204ENST00000554258 PHF7Q9BWX1 381 aaPredicted RBP20■□□□□ 0.79
NEK9-204ENST00000554258 ADD3Q9UEY8 706 aaKnown RBP20■□□□□ 0.79
NEK9-204ENST00000554258 TCRBV5S4A2TA0A5A2 114 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 MBD4O95243 580 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 ZBTB33Q86T24 672 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 SMC5Q8IY18 1101 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 DBF4BQ8NFT6 615 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 COPS5Q92905 334 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 EXOC6BQ9Y2D4 811 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 USP15Q9Y4E8 981 aaPredicted RBP19.99■□□□□ 0.79
NEK9-204ENST00000554258 EMSYQ7Z589 1322 aa19.99■□□□□ 0.79
NEK9-204ENST00000554258 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 RB1P06400 928 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 BMP3P12645 472 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 ALDH5A1P51649 535 aaPredicted RBP19.98■□□□□ 0.79
NEK9-204ENST00000554258 IKQ13123 557 aaPredicted RBP19.98■□□□□ 0.79
NEK9-204ENST00000554258 PUM1Q14671 1186 aaKnown RBP eCLIP19.98■□□□□ 0.79
NEK9-204ENST00000554258 TRAF7Q6Q0C0 670 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 ERC1Q8IUD2 1116 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 TMEM105Q8N8V8 129 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 TOP1MTQ969P6 601 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 MYO10Q9HD67 2058 aa19.98■□□□□ 0.79
NEK9-204ENST00000554258 C5orf67F2Z3F1 127 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 STAT2P52630 851 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 COASYQ13057 564 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 SCFD2Q8WU76 684 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 PPP2R3CQ969Q6 453 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 CLEC1BQ9P126 229 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 GTF2IRD1Q9UHL9 959 aa19.97■□□□□ 0.79
NEK9-204ENST00000554258 RASA1P20936 1047 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 PDE4BQ07343 736 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 PTK7Q13308 1070 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 FIBCD1Q8N539 461 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 C7orf31Q8N865 590 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 RHPN1Q8TCX5 695 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 CHURC1Q8WUH1 139 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 IFIH1Q9BYX4 1025 aaKnown RBP19.96■□□□□ 0.79
NEK9-204ENST00000554258 MKNK2Q9HBH9 465 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
NEK9-204ENST00000554258 LOC102724159A0A0B4J2E5 919 aa19.95■□□□□ 0.78
NEK9-204ENST00000554258 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
NEK9-204ENST00000554258 BMPR1AP36894 532 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms